Interferon gamma conjugates

专利摘要:
In the conjugates of the present invention exhibiting IFNG activity and consisting of at least one non-polypeptide moiety covalently attached to the IFNG polypeptide, the polypeptide consists of a different amino acid sequence from the parent IFNG polypeptide, which differs from the non-polypeptide At least one introductory or one intercalating amino acid residue consisting of an attachment group at the moiety. This conjugate can be used to treat a variety of diseases.
公开号:KR20020065517A
申请号:KR1020027006113
申请日:2000-11-13
公开日:2002-08-13
发明作者:안네 담 젠센；김 빌보르 안데르센；크리스티안 칼스텐 한센
申请人:맥시겐 홀딩스 리미티드；
IPC主号:

专利说明:

Interferon gamma conjugates {INTERFERON GAMMA CONJUGATES}
[2] Interferon-gamma (IFNG) is a cytokine produced by T-lymphocytes and natural killer cells and exists as a homodimer of two polypeptide subunits that are noncovalently bound. The complete form of each dimer consists of 143 amino acid residues (see SEQ ID NO 2) and its precursor form consists of 166 amino acid residue sequences comprising a signal sequence (see SEQ ID NO 1).
[3] Each subunit contains sites capable of two N-glycosylation reactions at positions 25 and 97 (Aggarwal et al., Human Cytokines, Blackwell Scientific Publications, 1992). Depending on the degree of glycosylation, the IFNG molecular weight range of the dimer type is 34-50 kDa (Farrar et al., Ann, Rev. Immunol, 1993, 11: 571-611).
[4] Gary et al. (Nature 298: 859-863, 1982), Taya et al. (EMBO J. 1: 953-958, 1982), Devos et. al. (Nucleic Acids Res. 10: 2487-2501, 1982), Rinderknecht et al. (J. Bol. Chem. 259: 6790-6797, 1984) and EP 77670, EP 89676, EP 110044 have been reported for the primary sequence of wild type human IFNG (huIFNG). The 3D structure of huIFNG has been reported by Ealick et al. (Science 252: 698-702, 1991).
[5] Various naturally occurring or mutated IFNG subunit polypeptide types have also been reported, including, for example, the Cys-Tyr-Cys N-terminal amino acid sequence at positions (-3)-(-1) for SEQ ID NO 2 To do; When the N-terminal methionine is included at position (-1) relative to SEQ ID NO 2; And various C-terminal truncations consisting of 127-134 amino acid residues. It is known that 1-15 amino acid residues can be removed from the C-terminus without altering the activity of the IFNG molecule. In addition, the release of huIFNG C-terminus has been described in Pan et al. (Eur. J. Biochem. 166: 145-149, 1987).
[6] Slodowski et al., (Eur. J. Biochem. 202: 1133-1140, 1991), Luk et al., (J. Biol. Chem. 265: 13314-13319, 1990), Seelig et al., (Biochemistry 27 : 1981-1987, 1988), Trousdale et al., (Invest.Ophthalmol. Vis. Sci. 26: 1244-1251, 1985), EP 146354, etc., reported on HuIFNG muteins. Nishi et al., (J. Biochem. 97: 153-159, 1985) reported on natural huIFNG variants.
[7] US 6,046,034 describes a thermally stable recombinant huIFNG (rhuIFNG) variant by stabilizing a dimeric IFNG variant by inserting up to four pairs of cysteine to form disulfide bonds.
[8] WO 92/08737 describes IFNG variants consisting of adding methionine to the N-terminus of all (residues 1-143) or portions (1-132) of wild-type human IFNG. EP 219 781 describes the sequence of SEQ ID NO 2 Partial huIFNG sequences consisting of amino acid residues 3-123 were described. US 4,832,959 describes a partial huIFNG sequence consisting of amino acid sequences 1-127, 5-146, 5,127 residues with three additional N-terminal amino acid residues (CYC) as compared to SEQ ID NO 2. US 5,004,689 describes a DNA sequence encoding huIFNG without the three N-terminal amino acid residues CYC, and has also reported the expression in E. coli . EP446582 states that E. coli produces rhuIFNG without N-terminal methionine. US 6,120,762 describes a peptide fragment of huIFNG consisting of amino acid residues 95-134 for SEQ ID NO 2.
[9] Wang et al. (Sci. Sin. B 24: 1076-1084, 1994) reported on rhuIFNG expressed in large quantities.
[10] Curling et al. (Biochem. J. 272: 333-337, 1990), Hooker et al., (J. of Interferon and Cytokine Research, 1998, 18: 287-295) report on glycosylation variation in rhuIFNG. I've done it.
[11] Kita et al. (Drug Des. Deliv. 6: 157-167, 1990) and EP 236987, US 5109120 have reported on polymer-modification of rhuIFNG.
[12] WO 92/22310 describes interalia huIFNG, an asialo glycoprotein conjugate derivative of interferon.
[13] IFNG fusion proteins have also been described. For example, EP 237019 describes a single chain polypeptide consisting of a moiety with interferon β activity and a moiety with IFNG activity. EP 158 198 describes a single chain polypeptide consisting of a portion showing IFNG activity and a portion showing IL-2 activity. Several documents (eg Landar et al. (J. Mol. Biol., 2000, 299: 169-179)) describe single chain dimer IFNG proteins.
[14] WO 99/02710 describes IFNG single chain polypeptides as one example of these. WO 99/03887 describes PEGylated polypeptide variants belonging to the growth hormone superfamily, where non-essential amino acid residues located in specific portions of the polypeptide have been replaced with cysteine residues. IFNG has been mentioned as an example of a growth hormone superfamily member, but no mention has been made of the modification of IFNG in detail.
[15] In Ziesche et al. (N. Engl. J. Med. 341: 1264-1269, 1999 and Chest 110: Suppl: 255, 1996) and EP 795332, IFNG is known as interstitial lung disease (also known as interstitial pulmonary fibrosis (IPF). It has been suggested that it can be used for the treatment of)), which can be used with prednisolone for this purpose. In addition to IPF, granulomatosis (Bolinger et al, Clinical Pharmacy, 1992, 11: 834-850), certain mycobacterial infections (N. Engl. J. Med. 330: 1348-1355, 1994), kidney cancer (J Urol. 152: 841-845, 1994), osteoporosis (N. Engl. J. Med. 332: 1594-1599, 1995), scleroderma (J. Rheurnatol. 23: 654-658, 1996), hepatitis B ( Hepatogastroenterology 45: 2282-2294, 1998), Hepatitis C (Int. Hopatol. Communic. 6: 264-273, 1997), Pneumonia Shock (Nature Medicine 3: 678-681, 1997), Rheumatoid Arthritis, etc. It can also be cured.
[16] Since rhuIFNG has been successfully used as a pharmaceutical compound for some viral infections and tumors, it is parenterally appropriate to use rhuIFNG via subcutaneous injection. After several hours, the maximum plasma concentration is reached, with a half-life in plasma of about 30 minutes after iv administration. For this reason, frequent injections are required for effective treatment with rhuIFNG. Major side effects include fever, chills, sweating, headache, muscle pain and drowsiness. This side effect is associated with rhuIFNG injections, which are observed within the first few hours after injection. Rare symptoms include local pain, erythema, elevated liver enzymes, reversible granulocytopenia, thrombin reduction and cardiac poisoning.
[17] Compared with huIFNG or rhuIFNG, it is desirable to provide new molecules with IFNG-activity that have improved properties against pharmacokinetics, homogeneity, immunity and other side effects.
[18] Brief description of the invention
[19] The present application describes improved IFNG type molecules that provide one or more of the desirable advantages mentioned above. In a first aspect, the invention relates to a conjugate that exhibits IFNG activity, wherein the conjugate consists of a non-polypeptide moiety and a polypeptide moiety, wherein the first non-polypeptide moiety is covalently bound to the IFNG polypeptide, and the polypeptide moiety is the parent. It consists of an amino acid sequence that differs from an IFNG polypeptide, wherein the different portion consists of at least one introduced or removed amino acid residue consisting of an attachment group to a non-polypeptide portion. The conjugate has a prolonged half-life in vivo when compared to huIFNG and rhuIFNG, and optionally may result in a reduced immune response when compared to rhuIFNG. Optionally, the molecule may have further improved properties in homologous molecule production, and may further have properties of increased stability against proteolysis and improved bioavailability.
[20] As a result, the conjugates of the present invention offer several advantages over currently available IFNG molecules, for example, they can further extend the injection cycle (or cycle with other means of administration), reduce side effects, and Decreases, the treatment efficiency increases. In addition, the dose of active protein is increased, and using the conjugate of the present invention, a more effective therapeutic response can be obtained.
[21] In another aspect, the invention relates to a conjugate having IFNG activity, wherein the construct consists of at least one N-terminal PEGylated IFNG polypeptide. The IFNG polypeptide may be huIFNG or any of the IFNG polypeptides described herein.
[22] In another aspect, the invention relates to a conjugate according to the invention, a nucleotide sequence thereof, an expression vector thereof and a method and means for preparing a polypeptide or conjugate.
[23] In another aspect, the present invention relates to a therapeutic composition consisting of a conjugate, a conjugate or composition of the present invention that can be used in therapy, a method of using the same in therapy, and a method of preparing a drug for treating a disease.
[24] Finally, the present invention relates to the use of specific IFNG conjugates for the preparation of drugs, pharmaceutical compositions, kits for the treatment of interstitial lung diseases, cancer, infections and inflammatory diseases, optionally in combination with glucocorticoids in the case of interstitial lung diseases. It is concerned with being available.
[1] The present invention relates to conjugates having interferon-gamma type activity, methods of preparing them, pharmaceutical compositions composed of these molecules, and the use of such pharmaceutical compositions for treating diseases.
[25] Justice
[26] In the present application and invention the following definitions may apply;
[27] A conjugate ("conjugate") or conjugated polypeptide is a heterologous (in composition and chimeric sense) molecule that can be made by covalently attaching one or more polypeptides to one or more non-polypeptide moieties. Covalently attached means that the polypeptide and non-polypeptide moieties are directly covalently bonded to each other or indirectly covalently bonded to each other via an intermediary moiety such as a linking bridge, a space or a linking moiety. Preferably the conjugate is soluble under relevant concentrations and conditions, for example in physiological fluids such as blood. Examples of conjugated polypeptides of the invention include glycosylated or PEGylated polypeptides. "Non-conjugated polypeptide" refers to the polypeptide portion of a conjugate.
[28] "Non-polypeptide moiety" refers to a molecule capable of binding to the attachment group of an IFNG polypeptide, such molecules may include, for example, polymer molecules, lipophilic molecules, sugar moieties or organically derived materials. . When used to describe the conjugates of the present invention, it is to be understood that the non-polypeptide moiety is linked to the polypeptide moiety of the conjugate via an attachment group of the polypeptide.
[29] A "polymer molecule" refers to a molecule formed by the covalent bond of two or more monomers, wherein the monomer is not an amino acid residue, but may also be an amino acid residue when the polymer is human albumin or other rich plasma protein. "Polymer" can be used interchangeably with "polymer molecule". "Sugar part" refers to a carbohydrate molecule attached by in vivo and in vitro glycosylation reactions such as N- or O-glycosylation. Except where the number of non-polypeptide moieties such as polymer molecules in the conjugate is clearly stated, it is understood that the "non-polypeptide moiety" included in the conjugates referred to in the present invention will be one or more non-polypeptide moieties. do.
[30] "Adhesion group" refers to an amino acid residue capable of binding to a related non-polypeptide moiety such as a polymer moiety or a sugar moiety. Useful attachment groups and paired non-polypeptide moieties will be apparent from the following table.
[31] Attachment amino acid Examples of non-polypeptide moieties Bonding method / dPEG activation references -NH ₂ N-terminal, Lys Polymer, PEG mPEG-SPATresylatedmPEG Shearwater Inc Delgado et al., Critical reviews in Therapeutic Durg Carrier Systems 9 (3,4): 249-304 (1992)-CHOOH C-terminal, Asp, Glu Polymer,-part per PEG mPEG-Hz In vitro binding Shearwater Inc -SH Cys Polymer, -PEG, sugar part PEGvinylsulphone PEG-maleimide in vitro binding Shearwater Inc Delgado et al, critical reviews in Therapeutic Durg Carrier System 9 (3,4): 249-304 (1992) -OH Ser, Thr, OH-Lys Per part in viv o O-linked glycosylation -CONH ₂ Asn as part of the N-glycosylation reaction Per part in vivo glycosylation reaction Aromatic groups Phe, Tyr, Trp Per part in vitro binding -CONH ₂ Gln Per part in vitro binding Yan and Wold, Biochemistry, 1984, Jul 31; 23 (16): 3759-65 Aldehyde Ketone Oxidized Carbohydrate Polymers-PEG.PEG-hydrazide PEGylation Andresz et al., 1978, Makromol. Chem. 179: 302; WO 92/16555 WO 00/23114 Guanidino Arg Per part in vitro binding Lundblad and Noyes, Chimical Reagents for Protein Modification, CRE Press Inc. Boca Raton, FIImidazole ring His Per part in vitro binding
[32] In the case of in vivo glycosylation, the "adhesive group" is used in a free manner to represent the amino acid residues that make up the N-glycosylated site (in the case of SEQ ID NO: N-X'-S / T / CX). , X 'represents any amino acid residue except proline, X "represents any amino acid residue equal to or different from X', preferably different from proline, N is asparagine, S / T / C is serine, threonine Or cysteine, preferably serine or threonine, most preferably threonine The asparagine residue of the N-glycosylation moiety is attached to the sugar moiety during the glycosylation reaction, but not other amino acids of the N-glycosylation reaction. Such attachment can be achieved only by the presence of a moiety, so that if the non-polypeptide moiety is a sugar moiety and the conjugate is obtained by N-glycosylation, the parent poly When used in connection with amino acid sequence modification of a teat, an "amino acid residue consisting of an attachment vessel to a non-polypeptide moiety" refers to an N-glycosylation moiety such that a functioning N-glycosylation site can be introduced or removed into the amino acid sequence. It should be understood that one, two or both of the amino acid residues that make
[33] In the present invention, amino acid names and atomic names (eg, CA, CB, CD, CG, SG, NZ, N, O, C) use those defined by Protein DataBank (PDB) (www.pdb.org). These include IUPAC Nomenclature and Symbolism for Amino Acids and Peptides (residue names, atom narnes etc.) and Eur. J. Biochem. 138, 9-37 (1984) and their revisions (Eur. J. Biochem. 152, 1). (1985) Sometimes CA is referred to as Cα and CB is referred to as Cβ "Amino acid residues" are intended to refer to amino acid residues belonging to: alanine (Ala or A), cysteine ( Cys or C), aspartic acid (Asp or D), glutamic acid (Glu or E), phenylalanine (Phe or F), glycine (Gly or G), cystidine (His or H), isoleucine (Ile or I ), Lysine (Lys or K), leucine (Leu or L), methionine (Met or M), asparagine (Asn or N), proline (Pro or P), glutamine (Glu or Q), arginine (Arg or R), three (Ser or S), threonine (Thr or T), valine (Vla or V), tryptophan (Trp or W), tyrosine (Tyr or Y) In this document the number of amino acid residues is referred to as a signal peptide (SEQ ID NO 2). The term used to identify amino acid positions and substituents can be described as follows: N25 (the position occupied by asparagine in the amino acid sequence found in SEQ ID NO 2). N25C (indicating that the Asp residue at position 25 is substituted with Cys.) Multiple substituents are represented by "+", e.g. Q1N + P3T / S indicates that glutamine at position 1 has been replaced with asparagine Pro at position 3 has been replaced with Thr or Ser, but suitably with Thr.
[34] A "nucleotide sequence" refers to a contiguous range of two or more nucleotide molecules. The nucleotide sequence may be a genome, cDNA, RNA, semisynthetic or synthetic origin or any complex portion thereof.
[35] "Polymerase chain reaction" or "PCR" generally refers to a method used to amplify a desired nucleotide sequence in vitro and is also described in US Pat. No. 4,683,195. In general, the PCR method is to repeat the primer extension synthesis process using oligonucleotide primers that can preferentially hybridize to the template nucleic acid.
[36] "Cells", "host cells", "cell lines", "cell cultures" may be interchanged with each other, and these terms should be understood to include progeny generated due to the growth or culture of the cells. "Transformation" or "transfection" refers to a process of introducing DNA into a cell and is used interchangeably.
[37] "Operably linked" means that two or more nucleotide sequences are covalently linked by an enzyme, wherein the sequences are linked so that they can function normally. For example, the fact that a nucleotide encoding a pre-sequence or secretory leader is "operably linked" to a nucleotide sequence that encodes a polypeptide is expressed as a pre-protein that participates in polypeptide secretion. To say that it can be; That the promoter or enhancer is linked to act on the coding sequence means that it can affect the transcription of the sequence; Coordination of the coding sequence to the ribosomal binding site means that it is positioned to perform translation. In general, “operably linked” refers to the contact of a linked nucleotide sequence, and in the case of a secretory leader, to contact on a reading. Linkage is achieved by ligation in the usual restriction enzyme moiety. If such sites do not exist, the synthesized oligonucleotide adapters or linkers can be used in parallel with standard recombinant DNA methods.
[38] "Introduce" means replacing an existing amino acid residue, but may also mean inserting additional amino acid residues. "Remove" means substitution of another amino acid residue with an amino acid residue to be removed, but can also mean a deletion (without substitution) of an amino acid residue to be removed.
[39] “Amino acid residues configured for attachment of a non-polypeptide moiety” refers to the case where an amino acid residue binds to a non-polypeptide moiety (for introduced amino acid residues) or to a combined (for removed amino acid residues).
[40] "One difference" or "different" is used to describe the amino acid sequence of an IFNG polypeptide described herein, which refers to the presence of additional differences. Thus, in addition to the specified amino acid differences, it is meant that other amino acid residues in addition to the specified amino acid residues may be mutated.
[41] " In vivo functional half-life" means in general terms the time to circulate in the plasma or blood stream before 50% of the conjugate molecules are removed or to the time that 50% of a given function of the conjugate is maintained. Polypeptides or conjugates are normally removed by one or more of the actions of the reticular endothelial cell system (RES), kidney, spleen or liver or by specific or unspecific proteolysis. Normally the extent of removal depends on the size (depending on the filtering range by glomerular filtration), the charge, the attached carbohydrate chain and the presence of cellular receptors for the protein. Retained functionality may be selected from anti-viral, antiproliferative, immune modulatory or IFNG receptor binding activity. In vivo functional half-life can be determined by any method known in the art to be described in the "Methods" section.
[42] "Increase in functional half-life on the in vivo" is the half-life of the in vivo functional half-life of the conjugate of the reference molecule, for example, huIFNG, optionally in the glycosylation as compared to the acylated form (as measured under that can match condition), non-bonded The functional half-life is increased at a statistically significant level compared to huIFNG or rhuIFNG.
[43] The term "immunogenic" in connection with a given substance refers to the ability of the substance to elicit a response from the human immune system. The immune response is by cell or antibody mediated response (see Roitt: Essential Immunology (8 ^th Edition, Blackwell) for further definition of immunogenicity).
[44] "Reduced immunogenicity" refers to a significantly lower immune response than the reference molecules such as huIFNG and rhuIFNG when measured under comparable conditions of the conjugates of the present invention.
[45] "IFNG shows the activity" means the polypeptide is to say that have one or more specific features of the IFNG, in particular huIFNG or rhuIFNG the ability to bind to the IFNG receptor with in vitro or in vivo (in vitro or in vivo bioactivity When measured at), functions including the signal causing conversion of the receptor upon conversion to huIFNG are included. IFNG receptors are described in Agues. et. al. (Cell 55: 273-280, 1988) and Calderon et al. (Proc. Natl. Acad. Sci. USA 85: 4837-4841, 1988). "IFNG polypeptide" refers to a polypeptide exhibiting IFNG activity. As such, it refers to a monomer or dimeric form of polypeptide. For example, where there are certain substitutions, they normally relate to IFNG polypeptide monomers. When referring to the IFNG portion of the conjugate of the present invention, it is usually a dimeric form (and thus consists of two modified IFNG polypeptide monomers described herein). Dimeric IFNG polypeptides refer to cases where two monomers are commonly associated or make a single chain dimeric IFNG polypeptide.
[46] The IFNG described herein may have the same in vivo or in vitro activity as huIFNG or rhuIFNG, or may be lower or higher than, for example, 1-100 when measured under the same conditions, when compared to huIFNG or rhuIFNG. have% in vivo or in vitro activity; For example, it has 1-25% or 1-50% or 25-100% or 50-100% activity of huIFNG or rhuIFNG activity.
[47] "Mother IFNG" refers to a molecule to be modified in accordance with the present invention. The parent IFNG, normally encoded by nucleotides, is modified according to the methods of the present invention to encode the polypeptide portion of the conjugate of the present invention. The parent IFNG is usually a huIFNG or rhuIFNG or variant or fragment thereof. A “variant” refers to a polypeptide that differs from one or more amino acid residues in the parent polypeptide sequence, usually 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, or 15 Amino acid residues are different. A fragment refers to a C-terminal or N-terminal truncation as part of the full-length huIFNG exhibiting IFNG activity.
[48] "Function site" refers to one or more amino acid residues that are essential to the function or operation of IFNG. Such amino acid residues are "located" at the site of function. Sites that function can be found by methods known in the art, preferably by analyzing the structure of a polypeptide complexed with a related receptor, such as an IFNG receptor.
[49] Conjugate of the present invention
[50] As mentioned above, in a first aspect the present invention relates to a conjugate exhibiting IFNG activity, wherein the conjugate consists of at least one non-polypeptide moiety covalently attached to the IFNG and an amino acid sequence different from the parent IFNG polypeptide. Consisting of polypeptides, wherein the parent is different from the parent means that there is at least one introduced amino acid residue comprising an attachment group for attachment to the non-polypeptide moiety or that the amino acid residue has been removed.
[51] Molecules were made to better bind to selected non-polypeptide moieties, and the conjugation pattern (eg, for optimal distribution of non-polypeptide moieties on the IFNG polypeptide surface) was optimized to compare with currently available huIFNG or rhuIFNG. The polypeptide can then be specifically modified by removing or introducing amino acid residues composed of non-polypeptide moiety attachment vessels to obtain new conjugate molecules with IFGN activity while at the same time having one or more improved properties. For example, by introducing an attachment group, a stronger conjugate can be obtained, either by boosting the IFNG polypeptide or by altering the content of a particular amino acid residue that is bound to the relevant non-polypeptide moiety. By removing one or more attachment groups, it is also possible to avoid conjugation of non-polypeptide moieties to portions of the polypeptide, where it is undesirable to attach non-polypeptide moieties to amino acid residues located at or adjacent to functional portions of the polypeptide, for example. This is because the conjugation at such sites may result in the loss or reduction of IFNG activity of the resulting conjugate due to impaired receptor factors. It may also be beneficial to remove the adhering group in proximity to another adhering group in order to prevent heterozygous bonding of such adhering groups. Suitable embodiments alter one or more amino acid residues of an IFNG polypeptide, such alterations include introduction as well as removal of amino acid residues consisting of moieties for attachment to selected non-polypeptide moieties. Such embodiments are of particular interest, including the possibility of specially designing IFNG polypeptides such that non-polypeptide moieties can be optimally conjugated.
[52] In addition to the removal or introduction of amino acid residues, the polypeptide may consist of other substituents that are not associated with the introduction or removal of amino acid residues consisting of groups for attachment to non-polypeptide moieties.
[53] The parent polypeptide to be modified according to the invention may be a polypeptide having IFNG activity and, therefore, may be derived from any origin other than human mammalian origin, but the parent polypeptide is preferably huIFNG having the amino acid sequence shown in SEQ ID NO 2 and , Or variants or fragments thereof. Variants of huIFNG have been described, for example, in the background section of the present invention, including huIFNG with CYC at the N-terminus, cysteine modified variants as described in US 4,046,034, and the like. Specific examples of fragments are those having 1-15 amino acid residues (eg 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, as described in the Background section of the present invention above). HuIFNG C-terminal truncated) having 12, 13, 14, and 15 amino acid residues, and N-terminal truncated having 1 to 3 amino acid residues.
[54] The parent IFNG polypeptide is a variant or fragment of huIFNG and it will be appreciated that the modified IFNG polypeptide prepared in such a parent consists of a mutation or truncation of the parent.
[55] In addition, the parent IFNG polypeptide can be a hybrid molecule between an IFNG polypeptide monomer and another homologous polypeptide that optionally includes one or more additional substituents introduced into the hybrid molecule. Such hybrids have been described in the background section of the present invention. Such hybrids may include amino acid sequences that differ from the amino acid sequence found in SEQ ID NO 2 by 10 or more amino acid residues or 15 or more amino acid residues. To be available for use in the present invention, hybrid molecules must have IFNG activity.
[56] A parent IFNG that is not of human origin can be modified in a manner similar to that described herein, for example, modifying the corresponding site of the parent IFNG that is not of human origin to a location described herein (not huhung and non-human). -Can be determined by arranging the amino acid sequence or 3D structure of the human IFNG).
[57] Amino acid residues (for introduction or removal) configured for attachment to a non-polypeptide moiety are selected based on the nature of the selected non-polypeptide moiety, which in most cases is based on the conjugation method used. For example, where the non-polypeptide moiety is a polymer such as polyethylene glycol or polyalkylene oxide derived molecules, the amino acid residues that can function as attachment groups are selected from cysteine, lysine, aspartic acid, glutamic acid and arginine Can be. If the non-polypeptide moiety is a sugar moiety, the attachment group is an in vivo glycosylation site, preferably an N-glycosylation site.
[58] When a non-polypeptide attachment group is introduced or removed in accordance with the present invention, the polypeptide position to be modified can be conveniently selected as follows;
[59] It is preferred to be located on the surface of the IFNG polypeptide, more preferably occupied by an amino acid residue having at least 25% of the side chains exposed to the solvent, or more preferably at least 50% of the side chains exposed to the solvent. Good to occupy (determined based on dimerized IFNG 3D or model, structure or model may consist of one or two IFNG receptor molecules). Such positions (e.g., exhibiting at least 25% or at least 50% surface exposure with or without receptor molecules) are mentioned in the Materials and Methods section of the present invention.
[60] It is also interesting to modify any of the 23 C-terminal amino acid residues of the parent IFNG (which can be modified by introducing or removing amino acid residues composed of non-polypeptide moiety attachment groups), because the surface of the IFNG polypeptide This is because such residues are shown to be located.
[61] In addition, in the conjugate IFNG polypeptide portion of the present invention, the attachment group located at the receptor-binding site of the IFNG may be removed, and may be removed by substitution with an amino acid residue composed of such an attachment group. Amino acid residues at the IFNG receptor binding site can be found in the Materials and Methods section described below. In the case of a single chain IFNG polypeptide, it is also sufficient to remove the attachment at the receptor-binding site in one of the monomers to obtain a single chain IFNG polypeptide conjugate having an active receptor binding moiety and an inactive site.
[62] To determine the optimal distribution of the attachment groups, the distance can be calculated for the amino acid residues located on the surface of the IFNG polypeptide based on the 3D structure of the IFNG dimeric polypeptide. More specifically, the distance between the CBs of amino acid residues composed of such attachment groups or another functional group of amino acid residues (NZ for lysine, CG for aspartic acid, CD for glutamic acid, SG for cysteine) and another The distance between CBs of amino acid residues was measured. In the case of glycine, CA is used instead of CB. In some IFNG polypeptides of the conjugates of the invention, a distance of at least 8 microns, in particular 10 microns, is necessary to avoid or reduce heterozygous.
[63] In addition, the amino acid sequence of an IFNG polypeptide may be different from the parent IFNG polypeptide, wherein one or more of the parts of the epitope are replaced by an amino acid consisting of a non-polypeptide portion attachment vessel to destroy or inactivate the epitope. Amino acid residues can be removed. Epitopes of huIFNG or rhuIFNG can be identified using methods known in the art, such as epitope mapping (Romagnoli et. al., Biol Chem, 1999, 380 (5): 553-9, DeLisser HM, Methods Mol Biol, 1999, 96: 11-20, Van de Water et al., Clin Immunol Immunopathol, 1997, 85 (3): 229-35, Saint-Remy JM, Toxicology, 1997, 119 (1): 77-81, and Land DP and Stephen CW, Curr Opin Immunol, 1993, 5 (2): 268-71). One method is to create a phage display library that expresses random oligopeptides of nine amino acid residues. IgGl antibodies were purified using immunoprecipitation from antiserum specific for huIFNG or rhuIFNG, and active phage was identified using immunoblotting. By sequencing the DNA of the purified reaction phage, the 3D structure of the IFNG can be placed to determine the sequence of the oligopeptide. The moieties identified on the structure may constitute epitopes and may be selected as target moieties for introducing non-polypeptide moiety attachment groups.
[64] In order to avoid destroying too much the structure and function of the parent IFNG molecule, the total number of amino acid residues to be altered in accordance with the present invention should not exceed 15 (as compared to the amino acid sequence found in SEQ ID NO 2). Preferably, the IFNG polypeptide consists of an amino acid sequence, which differs from the amino acid sequence found in SEQ ID NO 2 by 1 to 15 amino acid sequences, e.g., of amino acid residues found in SEQ ID NO 2 1 to 8 or 2 to 8 or 1 to 5 or 2 to 5 different. Thus, normally, IFNG polypeptides comprise 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 amino acid sequences unique to the SEQ ID NO 2 Consists of amino acid sequences with differing amino acid residues. Preferably, the number represents the total number of amino acid residues (introduced or removed) consisting of the groups for attachment of the related non-polypeptide moiety or the total number of amino acid residues to be introduced or removed consisting of such groups.
[65] The exact number of attachment groups in the dimer-type IFNG polypeptide and available for conjugation depends on the desired effect to be obtained by conjugation. The effect to be obtained depends on the nature and extent of the conjugation (e.g., the nature of the non-polypeptide moiety, the number of non-polypeptide moieties that are or are likely to be conjugated to the polypeptide, ie the number of moieties to be conjugated or Number of parts that should not be joined).
[66] The IFNG polypeptide portion of the conjugates of the invention may be truncated, for example, truncated at 1-15 C-terminal amino residues as described above in connection with the parent IFNG polypeptide, or 1-3 N- Truncated at terminal amino acid residues.
[67] In vivo functional half-life depends on the molecular weight of the conjugate and the number of attachment groups needed to provide increased half-life, ie the molecular weight of the non-polypeptide moiety in question. In one embodiment, the conjugates of the present invention have a molecular weight of at least 67 kDa, in particular 70 kDa (measure molecular weight using SDS-PAGE as described by Laemmli, UK Nature Vol 227 (1970), p680-85.). IFNG has a molecular weight (Mw) in the range of about 35-50 kDa, therefore an additional about 20-40 kDa is required to achieve the desired effect. This may provide 2-4 10 kDa PEG molecules or may be provided by other methods as described herein.
[68] In the conjugates of the present invention, at least 50%, preferably 80% to all of the attachable groups of all the conjugated attachment groups are occupied by the relevant non-polypeptide moiety. Thus, in suitable embodiments, the conjugates of the present invention consist of a range of 1-10 non-polypeptide moieties (eg, in the range of 2-8 or 3-6).
[69] As mentioned above, under physiological conditions, IFNG is present as a dimeric polypeptide. According to the present invention, a portion of the IFNG polypeptide of the conjugate of the invention is normally in dimeric form (can be made up of an association of two IFNG polypeptide molecules prepared as described herein). However, if desired, the IFNG polypeptide portion of the conjugates of the invention may be provided in a single chain form, wherein the two IFNG polypeptide monomers are linked via peptide bonds or peptide linkers. The provision of a single chain IFNG polypeptide has the advantage of allowing asymmetric mutation of the polypeptide because the two constituent IFNG polypeptides may be different. For example, one of the monomers may remove the PEGylation site at the receptor binding site and retain the other. Thus, after PEG reaction, one monomer may have a unique receptor-binding site while the other has a complete PEG site, which may result in a significantly increased molecular weight.
[70] Suitably the conjugates of the present invention have one or more of the following improved properties; 1) increased in vivo functional half-life compared to huIFNG or rhuIFNG, such as at least a 5-fold increase (about 10-fold or more); 2) reduced immunogenicity, eg, increased by at least 25%, 50%, more preferably at least 75% when compared to huIFNG or rhuIFNG.
[71] Conjugates of the invention wherein the non-polypeptide is a sugar moiety
[72] In suitable embodiments of the conjugates of the invention, the first non-polypeptide moiety is a sugar moiety, an O-linked or N-linked sugar moiety, and the IFNG polypeptide is at least one removed or introduced in vivo glycosylation site. It is composed.
[73] For example, an in vivo glycosylation site is introduced at the position of the parent IFNG polypeptide occupied by amino acid residues exposed on the surface of the polypeptide, preferably at least 25% of the side chain exposed to the solvent, more appropriately at the solvent. More than 50% of the side chains (these positions are described in the method section described here). The N-glycosylation site is introduced so that the N residues at that site are in this position. Similarly, the O-glycosylation reaction site is introduced so that the S or T residues that make up such site are at this position. In addition, in order to ensure an effective glycosylation reaction, the S or T residues of the N-residue or O-glycosylation site of the in vivo glycosylation site, in particular the N-glycosylation site, are 118 N-terminus of the IFNG polypeptide. Located within amino acid residues, and more preferably within 93 N-terminal amino acid residues. More suitably, the in vivo glycosylation site is introduced at a position where only one mutation is required to make such a site (e.g., any other amino acid residue already required to make a functional glycosylation site is already present. In the molecule).
[74] For example, the substituents used to induce additional N-glycosylation site introduction at positions occupied by amino acid residues exposed to the surface of the IFNG polypeptide and having at least 25% of the side chains exposed to the surface are as follows; Q1N + P3S / T, P3N + V5S / T, K6N + A8S / T, E9N + L11S / T, K12S / T, K13N + F15S / T, Y14N + N16S / T, G18S / T, G18N, G18N + S20T, H19N + D21S / T, D21N + A23S / T, G26N + L28S / T, G31N + L33S / T, K34N + W36S / T, K37S / T, K37N + E39S / T, E38N, E38N + S40T, E39N + D41S / T, S40N + R42S / T, K55N + F57S / T, K58N + F60S / T, K61S / T, K61N + D63S / T, D62N + Q64S / T, D63N, D63N + S65T, Q64N + I66S / T, S65N + Q67S / T, Q67N, Q67N + S69T, K68N + V70S / T, E71N + I73S / T, T72N + K74S / T, K74N + D76S / T, E75N + M77S / T, K80S / T, V79N + F81S / T, K80N + F82S / T, N85S / T, S84N + K86S / T, K87S / T, K86N + K88S / T, K87N + R89S / T, D90N + F92S / T, E93N + L95S / T, K94N, K94N + T96S, S99N, S99N + T101S, T101N + L103S / T, D102N + N104S / T, L103N + V105S / T, Q106S / T, E119N, E119N + S121T, P122N + A124S / T, A123N + K125S / T, A124N, A124N + T126S, K125N + G127S / T, T126N + K128S / T, G127N + R129S / T, K128N + K130S / T, R129N + R131S / T, K130N, K130N + S132T, R131N + Q133S / T, S132N + M134S / T, Q133N + L135S / T, M134N + F136S / T, L135N + R137S / T, F136N + G138S / T, R137N + R139S / T, G138N + R140S / T, R139N + A141S / T, R140N, R140N + S142T. Such substituents are indicated for huIFNG with amino acids found in SEQ ID NO 2. S / T refers to a serine or threonine residue suitably a threonine residue substituent.
[75] Substituents that induce the introduction of additional N-glycosylation sites at IFNG polypeptide surface exposed locations having at least 50% of the side chains exposed to the surface are as follows; P3N + V5S / T, K6N + A8S / T, K12S / T, K13N + F15S / T, G18S / T, D21N + A23S / T, G26N + L28S / T, G31N + L33S / T, K34N + W36S / T, K37N + E39S / T, E38N, E38N + S40S / T, E39N + D41S / T, K55N + F57S / T, K58N + F60S / T, K61S / T, D62N + Q64S / T, Q64N + I66S / T, S65N + Q67S / T, K68N + V70S / T, E71N + I73S / T, E75N + M77S / T, N85S / T, S84N + K86S / T, K86N + K88S / T, K87N + R89S / T, K94N, K94N + T96S, S99N, S99N + T101S, T101N + L103S / T, D102N + N104S / T, L103N + V105S / T, Q106S / T, P122N + A124S / T, A123N + K125S / T, A124N, A124N + T126S, K125N + G127S / T, T126N + K128S / T, G127N + R129S / T, K128N + K130S / T, R129N + R131S / T, K130N, K130N + S132T, R131N + Q133S / T, S132N + M134S / T, Q133N + L135S / T, M134N + F136S / T, L135N + R137S / T, F136N + G138S / T, R137N + R139S / T, G138N + R140S / T, R139N + A141S / T, R140N, R140N + S142T. Such substituents are indicated for huIFNG with amino acids found in SEQ ID NO 2.
[76] Substituents that require only one amino acid mutation to introduce into the N-glycosylation site include: K12S / T, G18S / T, G18N, K37S / T, E38N, M45N, I49N, K61S / T, D63N, Q67N, V70N, K80S / T, F82N, N85S / T, K87S / T, K94N, S99N, Q106S / T, E119N, A124N, K130N, R140N, especially K12S / T, G18N, G18S / T, K37S / T, E38N, K61S / T, D63N, Q67N, K80S / T, N85S / T, K94N, S99N, Q106S / T , A124N, K130N, R104N (position having at least 25% of the side chains exposed to the surface in structures without receptor molecules) or more preferably G18N, E38N, D63N, Q67N, K94N, S99N, A124N, K130N, R140N (receptor Position having at least 50% of the side chains exposed to the surface in a molecular free structure).
[77] In the list of substituents above, it is preferred to select a substituent located within 118 N-terminal amino acid residues, and in particular, to select a substituent located within 93 N-terminal amino acid residues.
[78] As pointed out above, in addition to one or more introduced glycosylation sites, existing glycosylation sites may be removed from the IFNG polypeptide. For example, to introduce glycosylation sites in the substituents listed above, it may be combined with substituents that remove any of the two natural N-glycosylation sites of huIFNG. For example, an IFNG polypeptide may consist of N25 and / or N97 substituents, for example, when the conjugate of the invention consists of non-polypeptides having K, C, D, E as an attachment group, the substituent may be N25K. / C / D / E and / or N97K / C / D / E.
[79] Some of the IFNG polypeptides of the conjugates of the invention may comprise one in vivo glycosylation site per monomer. However, in order to be large enough to increase the half-life in vivo , the polypeptide may have one or more in vivo glycosylation sites, particularly 2-7 in vivo glycosylation sites, for example, 2, 3, 4 It is preferred to consist of dog, five, six, seven in vivo glycosylation sites. Thus, an IFNG polypeptide may comprise one additional glycosylation site per monomer, or two, three, four introduced by the one or more substituents introduced, suitably described in the above list. Dogs, five, six, seven, or more glycosylation sites.
[80] In vitro glycosylation sites can be removed or introduced during IFNG polypeptide modification to introduce or remove polymer attachment sites, as described in the following paragraphs.
[81] Any of the glycosylated IFNG polypeptides with or without the at least one glycosylation site described in this paragraph may be further conjugated to the second non-polypeptide moiety. For example, the second non-polypeptide moiety can be a polymer such as PEG or any other non-polypeptide moiety. To this end, the conjugation may utilize the adhering groups present in the IFNG polypeptide or may introduce or remove adhering groups, in particular 1-6 total, for example 3-4 or 1, 2, 3, 4 It is also possible to use dog, five or six attachments for joining. Suitably, in the conjugates of the present invention (IFNG polypeptide consists of two glycosylation sites, the non-polypeptide moiety is added such that the molecular weight range added by the non-polypeptide moiety is 20-40 kDa, preferably 20 kDa or 30 kDa). Choose the number and molecular weight.
[82] In particular, the glycosylated IFNG polypeptide may be conjugated to a polymer having cysteine as an attachment group. To this end, one or more cysteine residues may be inserted into the IFNG polypeptide, as described in the "conjugation portion of the invention, ie, for non-polypeptide molecules having cysteines as an attachment group".
[83] Alternatively or in addition, the glycosylated IFNG polypeptide may be conjugated to a polymer having lysine as an attachment group. To this end, one or more lysine residues may be removed, which may be removed using any of the substituents described in the "conjugate portion of the invention, ie, the portion for non-polypeptide molecules having lysine as an attachment group". Alternatively or in addition, lysine residues may be introduced using the optional substituents mentioned in this paragraph.
[84] The acidic groups may be described as described in another method for conjugating polymers via lysine or cysteine, ie "conjugates of the invention having a non-polypeptide moiety capable of binding to an acidic group or capable of binding to an acidic group via any other suitable group". Through this, it can be joined.
[85] Conjugates of the invention wherein the first non-polypeptide moiety is a polymer
[86] In another embodiment, one of the polymers in which the first non-polypeptide moiety is described in the section entitled “Conjugation to a polymer” is a polymer, in particular a linear or branched PEG molecule (cysteine, lysine, aspartic acid, glutamic acid With (). The introduction or removal of such polymer adhesives is described in the following paragraphs. According to this embodiment a portion of the IFNG polypeptide of the conjugate is glycosylated using, for example, one or both of the natural N-glycosylation sites of huIFNG, or using an introduced glycosylation site as described in the preceding paragraph. It becomes a polypeptide.
[87] Conjugates of the invention when the non-polypeptide moiety is a molecule having a cysteine as an attachment group
[88] In a suitable embodiment, the first non-polypeptide moiety has a cysteine as an attachment group and at least one cysteine residue is introduced into an IFNG polypeptide site occupied by a surface exposed to an amino acid residue in a wild type human IFNG. Suitably, cysteine residues are introduced with overall consideration to the introduction or removal of the attachment groups for the non-polypeptide moieties given in the paragraph “Conjugates of the invention”. For example, an IFNG polypeptide consists of at least one substituent selected from: P3C, K6C, N10C, K13C, N16C, D21C, N25C, G26C, G31C, K34C, K37C, E38C, E39C, K55C, K58C, N59C, D62C, Q64C, S65C, K68C, E71C, E75C, N83C, S84C, K84C, K84C K87C, K94C, N97C, S99C, T101C, D102C, L103C, N104C (cysteine is introduced at the position occupied by amino acid residues having at least 50% of the side chains exposed on the surface in the structure with the receptor). N25C and N97C substituents are of interest, especially N25C + N97C, since N25 and N97 make up some of the native glycosylation sites of huIFNG when IFNG polypeptides are expressed in non-glycosylated hosts such as E. coli , Attracts attention.
[89] In addition, the IFNG polypeptide according to this embodiment may be composed of at least one cysteine introduced at a position occupied by any of amino acid residues 121-143 of huIFNG.
[90] Suitably the IFNG polypeptide of the conjugate according to this aspect may consist of a total of 1-8, for example 2-6 Cys, suitably 1-3 Cys per monomer.
[91] As described in the section “Conjugation to Polymers”, the step between the polypeptides and the polymers can be conjugated in either the stepwise manner referred to in this paragraph or by using a single step method. When the conjugate consists of two or more first non-polypeptide moieties, each of them normally has a molecular weight of 5 or 10 kDa. Suitable polymer is VS-PEG.
[92] Conjugates of the invention when the non-polypeptide moiety is a molecule having lysine as an attachment group
[93] In such embodiments, where the polymer having lysine as an attachment is a non-polypeptide moiety, the IFNG polypeptide is modified such that at least one lysine residue can be removed, wherein the lysine residue can be selected from; K6, K12, K13, K34, K37, K43, K55, K61, K68, K74, K80, K86, K87, K88, K94, K108, K125, K128, K130 (numbers are based on SEQ ID NO 2) . More preferably at least one lysine selected from K12, K34, K37, K108, K128, K130 may be removed. Thus, conjugation of such residues can be avoided. Lysine residues may be replaced with any other amino acid residues, but are preferably replaced with arginine or glutamine.
[94] In addition, the IFNG polypeptide is modified to introduce one or more lysine residues into the huIFNG position occupied by the exposed surface of the amino acid residues. Suitably lysine residues are introduced according to general considerations for the introduction or removal of the attachment groups for non-polypeptide moieties provided in the section “Conjugates of the invention”, in particular at least 25%, suitably 50% of the side chains It is introduced at a position occupied by the exposed amino acid residues, which can be identified by the methods described in the "Materials and Methods" section. In addition, at least one lysine may be introduced by substitution with any of amino acid residues 121-143 of SEQ ID NO 2. Or the IFNG polypeptide consists of lysine at at least one position selected from: D2, E7, E9, D21, D24, N25, E38, E39, D41, R42, D62, D63, E71, E75, D76, R89, D90, D91, E93, N97, R107, H111, E112 of SEQ ID NO 2 , E119, R129, R131, R137, R139, R140 (location of N, R, D, E, H of huIFNG).
[95] According to an embodiment, the IFNG polypeptide consists of substituents at one or more of the above positions, in particular having substituents at positions 1-15, for example 1-8 or 2-8, per monomer. For example, an IFNG polypeptide consists of having substituents at positions 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 of these positions.
[96] N25K and N97K substituents are of interest, especially N25K + N97K, since N25 and N97 make up some of the native glycosylation sites of huIFNG when IFNG polypeptides are expressed in non-glycosylated hosts such as E. coli , Attracts attention.
[97] For example, the IFNG polypeptide of a conjugate according to this embodiment consists of at least one of the above substituents for introducing a lysine residue in combination with at least one substituent that removes a lysine residue as defined above. Substitution with R or Q). For example, an IFNG polypeptide may be composed of one of N25K and N97K, in combination with at least one of K128R, K128Q, K130R, K130Q. More specifically, IFNG polypeptides include substituents K25K + K128R, N25K + K130R, N25K + K128R + K130R, N97K + K128R, N97K + K130R, N97K + K128R + K130R, N25K + N97K + K128R + K130R, N25K + N97K + K128R , N25K + N97K + K130R.
[98] According to aspects of the invention, when using a given conjugation method, the non-polypeptide portion of the conjugate may be any molecule having lysine as an attachment group (sugar moiety, lipophilic group or organic derived material), but the non-polypeptide portion may be It is preferable to be a polymer. The polymer may be any molecule described in the section “Conjugated to Polymer”, but is preferably selected from straight or branched polyethylene glycols or polyalkylene oxides. Most suitably the polymers are SS-PEG, NPC-PEG, aldehyde-PEG, mPEG-SPA, mPEG-SCM, mPEG-BTC (Shearwater Polymers Inc., SC-PEG (Enzon Inc.), tresylated mPEG ( US 5,880,255), oxycarbonyl-oxy-N-dicarboxyimide-PEG (US 5,122, 614). Normally, for conjugation to lysine residues, the non-polypeptide moiety should have a molecular weight of 5 or 10 kDa.
[99] Conjugates of the invention when the non-polypeptide moiety binds to an acidic group
[100] In another embodiment, the non-polypeptide portion of the conjugate of the invention has an acid group as an attachment group, wherein the IFNG polypeptide consists of an amino acid sequence that is different from the amino acid sequence found in SEQ ID NO 2, wherein the different points are amino acid residues. At least one surface exposed is replaced with aspartic acid or glutamic acid according to the general considerations provided in the section “Conjugates of the Invention”. Alternatively, Asp or Glu residues can be introduced into the parent IFNG polypeptide position occupied by K, R, Q, N. For example, N25, N97, K125, K128, R129, K130, R131 More preferably N25 or N97, most suitably N25 + N97 may be substituted with Asp or Glu.
[101] Similar to what is described in the shear rock, when the non-polypeptide moiety binds to such residues, one or more Asp, Glu residues can be removed from the receptor binding site.
[102] When the non-polypeptide portion of the conjugate according to the aspect of the present invention has an acid group as an attachment group, it may be a non-polypeptide portion having such a property, but the non-polypeptide portion is preferably a polymer or an organic derived material. In particular, it is preferable to be a polymer, and the conjugate is Sakane and Pardridge, Pharmaceutical Research, Vol. 14, No. 8, 1997, pp 1085-1091.
[103] Non-polypeptide moieties of the conjugates of the invention
[104] As described above, the non-polypeptide moiety of the conjugate of the invention is suitably selected from polymers, lipophilic compounds, sugar moieties (via in vivo glycosylation), organic derived materials. All of these substances impart desirable properties to the polypeptide portion of the conjugate, particularly those that increase functional half-life or decrease immunogenicity in vivo . Polypeptide portions of the conjugates normally comprise two or more different forms of non-polypeptide portions, such as polymers and sugar portions; Lipophilic tile sugar moieties; Organic derived materials and sugar moieties; Lipophilic moieties and polymers. Conjugation can occur simultaneously or sequentially to two or more non-polypeptide moieties.
[105] Method for preparing the conjugate of the present invention
[106] The conjugation to certain types of non-polypeptide moieties is described in the sections “Conjugation to lipophilic compounds”, “Conjugation to polymers”, “Conjugation to sugar moieties”, and “Conjugation to organic derived materials”.
[107] Conjugation to lipophilic compounds
[108] The polypeptide and lipophilic compound may be conjugated to each other directly or via a linker. The lipophilic compound may be composed of natural or synthetic compounds such as saturated or unsaturated fatty acids, fatty acid diketones, terpenes, prostaglandins, vitamins, carotenoids, steroids, such as one or more alkyl, aryl, alkenyl, and other polyunsaturated compounds. The branches may be carbonic acid, alcohols, amines, sulfonic acids and the like. Conjugation between a polypeptide and a lipophilic compound (conjugation, which may optionally be via a linker), is known in the art, for example as described in Bodanszky in Peptide Synthesis, John Wiley, New York, 1976 and WO 96/12505. Can be carried out.
[109] Bonding to Polymers
[110] The polymer capable of binding to the polypeptide is any suitable polymer, for example natural or synthetic homo- or hetero-polymer, generally having a molecular weight in the range of 300-100,000 Da, specifically 300-20,000 Da, more suitably 500 Polymers in the range of -100,000 Da, most preferably in the range of 500-5000 Da.
[111] Homo-polymers include polyols (poly-OH), polyamines (poly-NH ₂ ), polycarbosilic acid (poly-COOH) and the like. The release-polymers consist of one or more different bonding groups such as hydroxyl groups and amine groups.
[112] Suitable polymers include polyalkylene oxides (PAO), polyalkylene glycols (PAG)-such as polyethylene glycol (PEG) and polypropylene glycol (PPG), branched PEGs-, polyvinyl alcohol (PVA) ), Poly-carboxylade, poly (vinylpyrrolidone), polyethylene-co-maleic anhydride, polystyrene-co-maleic anhydride, dextran- such as carboxymethyl-dextran-, or It is selected from other biopolymers suitable for reducing immunogenicity, increasing functional half-life in vivo or increasing serum half-life. Another example of a polymer may be human albumin or other abundant plasma proteins. In general, polyalkylene glycol-derived polymers are biocompatible, non-toxic, non-immunogenic, non-immunogenic, have a wide variety of water soluble properties, and are readily secreted from living organisms.
[113] PEG is a suitable polymer that can be used because there are few cross-linkable reactors when compared to polysaccharides such as dextran. In particular, monofunctional functional PEGs, such as monomethoxypolyethylene glycol (mPEG), are suitable because their binding chemistry is relatively simple (a single reactor can be used for conjugation with attachment groups on polypeptides). Only). As a result, there is no risk of cross-linking, and the resulting polypeptides have considerable homogeneity and are easier to control the reaction of the polymer with the polypeptide.
[114] In order to covalently bind a polymer to a polypeptide, the hydroxy end group of the polymer must be provided in an active state. For example, as a reactive functional group, a primary amino group, hydrazide (HZ), thiol, succinate ( SUC), succinimidyl succinate (SS), succinimidyl succinamide (SSA), succinimidyl propionate (SPA), succinimidyl carboxymethylate (SCM), benzotriazole carbonate (BTC) , N-hydroxysuccinimide (NHS), aldode, nitrophenylcarbonate (NPC), tresylate (TRES) and the like should be provided. Properly activated polymers may be commercially available, such as those available from Shearwater Polymers, Inc., Huntsville, AL, USA. Alternatively, the polymer can be activated by methods known in the art, for example using the method described in WO 90/13540. Specific examples of activated linear or branched polymers that can be used in the present invention are Sharwater Polymers, Inc. 1997 and 2000 Catalogs (Functionalized Biocompatible Plymers for Research and Pharmaceuticals, Polyethylene Glycol and Derivatives, incorporated herein by reference). Examples of activated PEG polymers include the following; Linear PEGs include NHS-PEG (ie SPA-PEG, SSPA-PEG, SBA-PEG, SS-PEG, SSA-PEG, SC-PEG, SG-PEG and SCM-PEG), NOR-PEG, BTC-PEG, EPOX-PEG, NCO-PEG, NPC-PEG, CDI-PEG, ALD-PEG, TRES-PEG, VS-PEG, IODO-PEG, MAL-PEG, and branched PEGs such as PEG2-NHS ( Described in US 5,932,462 and US 5,643,575). In addition, the following publications describe useful polymer or PEGylation chemistries: US5,824,778, US5,476,653, WO97 / 32607, EP229108, EP402378, US4,902,502, US5,281,698, US5,122,614, US5, 219,564, WO92 / 16555, WO94 / 04193, WO94 / 14758, WO94 / 17039, WO94 / 18247, WO94 / 2804, WO95 / 00162, WO95 / 11924, WO95 / 13090, WO95 / 33490, WO96 / 00080, WO97 / 18832, WO98 / 41562, WO98 / 48837, WO99 / 32134, WO99 / 32139, WO99 / 32140, WO96 / 40791, WO98 / 32466, WO95 / 06058, EP439508, WO97 / 03106, WO96 / 21469, WO95 / 13312, EP921131, US5, 736,625, WO98 / 05363, EP809996, US5,629,384, WO96 / 41813, WO96 / 07670, US5,473,034, US5,516,673, EP605963, US5,382,657, EP510356, EP400472, EP183503, EP154316.
[115] Conventional methods are used for conjugating a polypeptide to an activated polymer, and the methods described in the following literature are also used (also described as appropriate methods for polymer activation); Harris and Zalipsky, eds., Poly (ethylene glycol ) Chemistry and Biological Applications, AZC, Washington; RF Taylor (1991), "Protein immobilisation. Fundamental and applications", Marcel Dekker, N.Y .; S. S. Wong (1992), "Chemistry of Protein Conjugation and Crosslinking", CRC Press, Boca Raton; G.T. Hermanson et al., (1993), "Immobilized Affinity Ligand Techniques", Academic Press, N.Y.). Those skilled in the art will appreciate that the activation method and conjugation chemistry may vary depending on the functional group of the polymer (eg, amino, hydroxyl, carboxyl, aldehyde or sulfahydryl) and the attachment group of the IFNG polypeptide. PEGylation reactions can be used to conjugate all available attachments on the polypeptide (eg, attachments exposed on the surface of the polypeptide, etc.) or to conjugate to specific attachments such as N-terminal amino groups (US 5,985,265). Conjugation can also be made in one step or step reactions (as described in WO99 / 55377).
[116] PEGylation reactions are designed to produce molecules that are optimal for the number of PEG molecules attached, the size and shape of the molecules (e.g. they are linear or branched), and where such molecules are attached in the polypeptide. . For example, the molecular weight of the polymer to be used can be selected based on the desired effect to be obtained. For example, if the primary purpose of the conjugation is to obtain a conjugate with a high molecular weight (to reduce the rate of removal from the kidneys), then conjugation should be possible to polymers with slightly higher molecular weights in order to obtain the desired molecular weight. In order to increase the degree of epitope blocking, a large number of low molecular weight polymers (eg, 5,000 Da) may be used to effectively block all or most epitopes of the polypeptide. For example, 2-8, for example, 3-6 polymers can be used.
[117] Where only a single attachment to a protein is to be conjugated (as described in US 5,985,265), it is advantageous for the linear or branched polymer to have a high molecular weight of about 20 kDa.
[118] Normally, polymer conjugation is carried out under conditions aimed at allowing all available polymer attachments to react with the polymer. In general, the molar ratio of activated polymer attachment to the polypeptide can be made 1000-1, in particular 200-1, suitably 100-1, for example 10-1 or 5-1, to obtain an optimal response. However, an equivalent molar ratio may be used.
[119] According to the present invention, it is also conceivable to bind the polymer to the polypeptide via a linker, suitable linkers being known to those skilled in the art. Suitable examples are cyanuric chloride (Abuchowski et al., (1997), J. Biol. Chem., 252, 3578-3581; US 4,179,337; Shafer et al., (1986), J. Polym. Sci. Polym) Chem.Ed., 24, 375-378).
[120] In accordance with methods known in the art, it is possible to block residual activated polymers upon conjugation, for example by adding primary amines to the reaction mixture for blocking and the resulting inactivated molecules can be employed using appropriate methods. To remove it.
[121] Combined on our part
[122] It can be bound to the sugar moiety in vivo or in vitro . To obtain the IFNG polypeptide having the activity (already modified to introduce one or more in vivo glycosylation reaction site) of in vivo glycosylation reaction, in the eukaryotic expression host glycosylated a nucleotide sequence of the polypeptide part of the conjugate code It must be inserted. Expression host cells can be selected from fungi (filamentous fungi or yeasts), insects, animal cells, transgenic plant cells. In addition, glycosylation reactions can be obtained in the human body by using a nucleotide sequence encoding a polypeptide of the present invention or a polypeptide portion of the conjugate of the present invention in gene therapy. In one embodiment, the host cell is a mammalian cell such as CHO cell, BHK or HEK cell (HEK293) or an insect cell such as SF9 cell or yeast cell such as Saccharomyces cerevisiae, Pichia pastoris or any other suitable glycosylation host (in the following) Further description). Alternatively, the sugar moiety attached to the IFNG polypeptide by in vivo glycosylation can be further modified using glycosyltransferase, for example, using the commercially available glycoAdvance ^™ from Neose, Horsham, PA, USA. . Thus, expression and in vivo glycosylation by CHO cells may be followed by increased silination of the glycosylated IFNG polypeptide.
[123] Covalently binding glycosides to the amino acid residues of IFNG in vitro can be used to modify or increase the number or profile of carbohydrate substituents. Depending on the binding mode employed, a) arginine and histidine; b) free carboxyl groups; c) free sulfahydryl groups such as those in cysteine; d) free hydroxyl groups such as in serine, threonine, tyrosine, hydroxyproline; e) aromatic residues such as those in phenylalanine or tryptophan; f) Sugars can be attached to the amide group of glutamine. Such amino acid residues consist of a group for attachment to a sugar moiety that can be removed or inserted in an IFNG polypeptide of a conjugate of the invention. Suitable methods for in vitro binding are described in WO 87/05330 and Aplin et al., CRC Crit Rev. Biochem., Pp 259-306, 1981. Transglutaminase (TGases) can be used to bind sugar moieties or PEG in vitro to protein and peptide-bound Gln-residues (Sato et al., 1996 Biochemistry 35, 13072-13080; EP 725145).
[124] Binding to Organic Derived Materials
[125] IFNG polypeptides can be covalently modified by reacting the attached group of the polypeptide with an organic derived material. Suitable derivatization materials and methods are known in the art. For example, the most commonly used cystenyl moieties are reacted with α-haloacetates (and corresponding amines) such as chloroacetic acid or chloroacetaamide to provide carboxymethyl or carboxyamidomethyl. . Bromotriloloacedon, α-bromo-β- (4-imidozoyl) propionic acid, chloroacetyl phosphate, N-alkylmelimides, 3-nitro-2-pyridyl disulfide, methyl 2- Cysteinyl residues can be induced by reaction with pyridine disulfide, p-chloromercurybenzoate, 2-chloromercury-4-nitrophenol, chloro-7-nitrobenzo-2-oxa-1,3-diazole. Histidyl residues can be derived by reaction with diethylpyrocarbonate pH 5.5-7.0 because the material is relatively specific for histidyl side chains. Para-bromophenolacyl bromide is also useful; This reaction is carried out in 0.1M sodium cacodylate (pH 6.0). Lysinyl and amino terminal residues reacted with succinic or other carboxylic anhydrides. The derivatization reaction using these substances has the effect of reversing the charge of the lysine residue. Other suitable reagents for deriving residues comprising α-amino include imidoesters such as methyl picorinimidate; Pyridoxal phosphate; Pyridoxal; Chloroborohydride; Trinitrobenzenesulfonic acid; O-methylisourea; 2,4-pendanedione; Glyoxylates and transaminase-catalyzed reactions. Arginine residues are reacted with one or several conventional reagents to modify them, including phenylglyoxal, 2,3-butanedione, 1,2-cyclohexanedione, ninhydryl and the like. The derivatization reaction of arginine residues should be carried out under alkaline conditions because the pKa of the guanidine functional group is high. In addition, such reagents may react not only with lysine groups but also with arginine guanidino groups. Carboxyl side groups (aspartyl or glutamyl) can be selectively modified by reaction with carbodiimide (R-N = C = N-R '); Wherein R and R 'are different alkyl groups such as 1-cyclohexyl-3- (2-morpholinyl-4-ethyl) carbodiimide or 1-ethyl-3- (4-azonia-4,4- Dimethylphenyl) carbodiimide. In addition, aspartyl and glutamyl residues are reacted with ammonium ions to convert them into asparaginyl and glutaminyl residues.
[126] It has been reported that excessive polymer conjugation may cause the polymer to lose activity of the conjugated polypeptide. This problem can be solved by removing the attachment located at the functioning part or blocking the functional group before joining. Such a strategy is included in embodiments of the present invention (one example of the first strategy is to remove lysine residues located in proximity to the functional group). More specifically, according to the second strategy, the conjugation between the polypeptide and the non-polypeptide moiety is such that a helper molecule capable of binding the functional group of the polypeptide is carried out under conditions that can block the functional group of the IFNG polypeptide. Suitably, the helper molecule specifically recognizes the functional site of the polypeptide, such as a reporter. Alternatively, the helper molecule may be an antibody, in particular a monoclonal antibody that recognizes a polypeptide exhibiting IFNG activity. In particular, the helper molecule may be a neutralizing monoclonal antibody.
[127] Before conjugation, the helper molecule and the polypeptide will interact. This blocks or protects the functional site of the polypeptide, which in turn renders it unusable for induction by non-polypeptide moieties such as polymers. After eluting from the helper molecule, the conjugation can be restored between the non-polypeptide moiety and the polypeptide, having at least partially conserved functional groups.
[128] Polypeptides having blocked functional sites can be conjugated successively (using conventional methods) to a polymer, a lipophilic compound, a sugar moiety, an organic derived material or any other compound.
[129] In further embodiments, the helper molecules are first covalently bonded to a column packing material such as a solid such as Sephadex or agarose beads or to a surface such as a reaction vessel. Subsequently, the polypeptide was loaded onto the column material with the helper molecules and conjugation was performed using methods known in the art. Elution can be used in this process to liberate the polypeptide conjugate from the helper molecule. Polypeptide conjugates are eluted using conventional techniques under physicochemical conditions, which conditions must be such that the polypeptide conjugates do not undergo continuous degradation. The fluidized bed comprising the polypeptide conjugate is separated from the solid phase, where the helper molecules remain covalently bound. It can also be separated in other ways; For example, a helper molecule can be directed to a second molecule (biotin) that a specific binder (streptavidin) can recognize, a specific binder can be linked to a solid phase, passed through a first helper-solid column, Upon release, the polypeptide conjugate can be eluted with the helper molecule-second molecular complex retained on the column to separate the polypeptide conjugate from the helper-molecule-second molecular complex. The polypeptide conjugate can be released from the helper molecule in any suitable manner. De-protection reactions can be obtained under conditions that allow helper molecules to dissociate from sites with the function of IFNG. For example, the pH may be adjusted from acidic to alkaline pH to dissociate the complex between the conjugated antibody and the anti-idiotype antibody.
[130] Tagged polypeptide conjugates
[131] In another embodiment, an IFNG polypeptide can be expressed as a fusion protein with a tag, wherein a "tag" is generally an amino acid sequence or peptide consisting of 1-30, for example 1-20 amino acid residues. For quick and easy purification, the tag is used as a convenient tool for conjugating between tagged IFNG polypeptide and non-polypeptide moieties. In particular, a tag is used to conjugate a microtiter plate or other carrier, such as a paramagnetic rod, with the tag, through which the tagged polypeptide is anchored to the surface. In the case of conjugation to an IFNG polypeptide tagged in a microtiter plate, the tagged polypeptide can be immobilized on the microtiter plate directly from the culture (no further purification is required), so that the conjugation can be performed. Thus, the total number of process steps (from expression to splicing) can be reduced. The tag can also function as a space molecule that improves access to the immobilized polypeptide to be conjugated. The conjugation can be performed using a polypeptide tagged to a non-polypeptide moiety described herein, eg, a polymer such as PEG.
[132] The nature of the particular tag that can be used is not critical if it is expressed with the polypeptide and can be immobilized on a suitable surface or carrier material. Suitable tags may be commercially available (Unizyme Laboratories, Denmark). For example, a tag can consist of the following sequences;
[133] His-His-His-His-His
[134] Met-Lys-His-His-His-His-His
[135] Met-Lys-His-His-Ala-His-His-Gln-His-His
[136] Met-Lys-His-Gln-His-Gln-His-Gln-His-Gln-His-Gln-His-Gln
[137] (All products of Unizyme Laboratories, Denmark)
[138] or
[139] EQKLI SEEDL (C-terminal tag as described in Mol. Cell. Biol. 5: 3610-16, 1985)
[140] DYKDDDDK (C- or N-terminal tag)
[141] YPYDVPDYA
[142] Antibodies to this tag available from ADI, Aves Lab, Research Diagnostics.
[143] Conventional methods of using polypeptides tagged for PEG reactions are provided in the following materials and methods.
[144] Commercially available enzymes can be used to continuously cleave tags in polypeptides.
[145] Polypeptides of the Invention
[146] In yet another aspect of the invention, the invention relates to the overall novel IFNG polypeptide described herein. The novel polypeptides are important intermediate compounds in making the conjugates of the present invention. In addition, the polypeptide itself has interesting properties.
[147] For example, the novel IFNG polypeptide consists of at least one substituent on K, R, D, E, C, S, T, N of the surface exposed to amino acid residues, as described in detail earlier in the application.
[148] How to Prepare an IFNG Polypeptide
[149] IFNG polypeptides, optionally glycosylated forms, can be made by any suitable method known in the art. Such methods include constructing a nucleotide sequence encoding a polypeptide and expressing the sequence in an appropriately altered or transfected host. However, the polypeptides of the present invention can be produced (somewhat less efficient) by chemical synthetic or recombinant DNA techniques and complex methods thereof.
[150] Nucleotide sequences of the invention encoding IFNG polypeptides (monomer or single chain form) isolate or synthesize nucleotide sequences encoding the parent IFNG, such as huIFNG having the amino acid sequence of SEQ ID NO 2, and synthesize the synthesized nucleotide sequence. Modifications are made by introducing (inserting or replacing) or removing (deleting or replacing) related amino acid residues.
[151] According to methods known in the art, nucleotide sequences can be modified through site-directed mutation formation (Mark et al., "Site-specific Mutagonesis of the Human Fibroblast Interferon Gene", Proc. Natl. Acad. Sci. USA, 81, pp. 5662-66 (1984); and US 4,588,585).
[152] Alternatively, the nucleotide sequence can be made by chemical synthesis methods, for example using an oligonucleotide synthesizer, wherein the oligonucleotide is designed based on the amino acid sequence of the desired polypeptide and suitably the host from which the recombinant polypeptide is made. Selected cords of cells are selected and constructed. For example, several small oligonucleotides encoding portions of the desired polypeptide are synthesized and assembled using PCR, ligation or ligation chain reaction (LCR). Individual oligonucleotides generally contain 5 'or 3' overhangs for complementary assembly.
[153] Once assembled (synthetic, site-directed mutagenesis or another method), the nucleotide sequence encoding the polypeptide can be inserted into a recombinant vector and able to act on regulatory sequences necessary to express IFNG in the desired transformed host cell. To connect.
[154] Of course, it should be appreciated that not all vectors and expression control sequences work equally to express nucleotide sequences encoding the IFNG polypeptides described herein. Not all hosts function equally against the same vector system. However, one of ordinary skill in the art would be able to select such vectors, expression control sequences and hosts without undue experimentation. For example, in selecting a vector, the host must be considered because the vector must be replicated in the host or inserted into the chromosome. The number of copies of the vector, the ability to control the number of copies, the expression of any other protein encoded by the vector, for example the expression of antibiotic markers, etc. are also factors to be considered. In selecting an expression control sequence, various factors should be considered. This includes the relative strength, controllability of sequences, suitability with nucleotide sequences encoding polypeptides, in particular secondary structures. The host should be selected in consideration of its compatibility with the selected vector, the toxicity of the products encoded by the nucleotide sequences, their secretory characteristics, the ability to fold correctly into the polypeptide, and the degree of purification of the products encoded by the nucleotide sequences.
[155] Recombinant vectors can also be autologous replication vectors, which can exist as extrachromosomes, such as plasmids, whose replication is separate from chromosomal replication. Alternatively, when the vector is introduced into a host cell, it may be integrated into the host cell genome and replicated into the integrated chromosome.
[156] The vector is preferably an expression vector, wherein the nucleotide sequence encoding the IFNG polypeptide for nucleotide sequence transcription is operably linked to additional fragments as needed. Such vectors generally become plasmids or viral DNA. Suitable expression vectors for expression in the host cells referred to herein are those that are commercially available. Useful expression vectors for eukaryotic hosts include SV40, bovine papilloma virus, adenovirus, vectors consisting of expression control sequences of cytomegalovirus, and the like. Specific vectors include pCDNA3.1 (+) ＼Hyg (Invitrogen, Carlsbad, CA, USA) and pCI-neo (Stratagene, LA Jola, CA, USA). Useful expression vectors suitable for bacterial hosts include known bacterial plasmids such as plasmids from E. Coli , i.e. a wide range of host plasmids, such as pBR322, pET3a, pET12a (Novagen Inc., WI, USA) and RP4, phage DNAs ( Various phage lambda derivatives) such as NM989 and other DNA phages such as M13 and filamentary single stranded DNA phages. Useful vectors for yeast cells include 2μplasmid and derivatives thereof, POT1 vector (US 4,931,373), pJSO37 vector (Okkels, Ann.New York Acad. Sci. 782, 202-207, 1996), pPICZ A, B, C (Invitrogen) Etc. are included. Vectors useful for insect cells include pVL941, pBG31l (Cate et al., "Isolation of the Bovine and Human Genes for Mullerian Inhibiting Substance And Expression of the Human Gene In Animal Cells", Cell, 45, pp. 685-98 (1986), pBluebac 4.5, pMelbac (Invitrogen), and the like.
[157] Other vectors that can be used in the present invention also include vectors that allow nucleotide sequences encoding IFNG polypeptides to be replicated. Vectors that enable such amplification are also known in the art. For example, amplification vectors using DHFR amplification (Kaufman, US Pat. No. 4,470,461, Kaufman and Sharp, "Construction OF A Modular Dihydrafolate Reductaso cDNA Gene: Analysis Of Signals Utilized For Efficient Expression", Mol. Cell. Biol., 2, pp. 1304-19 (1982)) and amplification vectors (US 5,122,464 and EP 388,841) using glutamine synthetase ("GS") amplification.
[158] Recombinant vectors further include DNA sequences that allow the vector to replicate in the host cell in question. An example of such a sequence, where the host cell is a mammalian cell, may be an SV40 replication origin. If the host cell is a yeast cell, the appropriate sequences capable of replicating the vector are the yeast plasmid 2μ replication gene REP 1-3 and the origin of replication.
[159] Vectors are selectivity markers, which are genes, for example, genes in which the product of a particular gene can compensate for defects in a host cell, that is, a gene encoding dihydrofolate reductase (DHFR) or a Schizosaccaromyces pombe TPI gene (described by PR Russell). , Gene 40, 1985, pp. 125-130) or drugs such as ampicillin, kanamycin, tetracycline, chloramphenicol, neomycin, hygromycin, methotrexate. In the case of filamentous fungi, selectivity markers include amdS , pyrG, arcB , niaD , sC and the like.
[160] A "regulatory sequence" is defined herein to include all components necessary for or assist in the expression of an IFNG polypeptide. Each regulatory sequence can be a sequence unique to a nucleic acid sequence encoding a polypeptide or a sequence introduced exogenously. Such regulatory sequences include, but are not limited to, leader, polyadenylation sequence, propeptide sequence, promoter, enhancer or upstream activating sequence, signal peptide sequence and transcription terminator. At a minimum, regulatory sequences include promoters.
[161] Various ranges of expression control sequences can be used in the present invention. Useful expression control sequences include not only expression control sequences associated with the structural genes of the above-described expression vectors, but also any sequences known to regulate expression of prokaryotic or eukaryotic cells, viral genes thereof, or various complexes thereof.
[162] Examples of appropriate regulatory sequences that direct transcription in mammalian cells include the early and late promoters of SV40 and adenovirus, namely the two major late promoters of adenovirus, the MT-1 (metallothionine gene) promoter, and human cytomegalo. Viral super electric gene promoter (CMV), human elongation factor 1α (EF-1α) promoter, Drosophila Drosophila minimal heat shock protein 70 promoter, Raus Salcoma virus (RSV) promoter, human ubiquitin C (UbC) promoter, human Growth hormone terminators, SV40 or adenovirus Elb partial polyadenylation reaction signals and Kozak consensus sequences (Kozak, MJ Mol. Biol. 1987 Aug 20; 196 (4): 947-50).
[163] To improve expression in mammalian cells, synthetic introns can be inserted in the 5 'untranslated portion of the nucleotide sequence encoding the IFNG polypeptide. Synthetic introns include, for example, synthetic introns obtained from plasmid pCI-Neo (Promega Corporation, WI, USA).
[164] Suitable regulatory sequences used to direct transcription in insect cells include polyhedrin promoter, P10 promoter, Autographa californica polyhedrosis virus based protein promoter, baculovirus hyperelectric gene 1 promoter, baculovirus 39K delayed-initial gene promoter, SV40 Polyadenylation reaction sequences and the like.
[165] Suitable regulatory sequences available in the host cell include, for example, the promoter of the yeast α-mating system, the yeast triose phosphate isomerase (TP1) promoter, the promoter of the yeast glocoritic gene or the alcohol dehydrogenase gene, ADH2. -4c promoter and inducible GAL promoter.
[166] Suitable regulatory sequences available for filamentous fungal host cells include, for example, the ADH3 promoter and terminator, Aspergillus oryzae TAKA amylase triose phosphate isomerase or alkaline protease, A. niger α-amylase, A. niger or A. nidulans Glycoamylase, A. nidulans acetamidases, Rhizomucor miehei aspartic proteinases or lipases, TPI1 terminators, promoters derived from genes encoding ADH3 terminators, and the like.
[167] Suitable regulatory sequences available for bacterial host cells include, for example, promoters of the lac system, trp system, TAC or TRC system and major promoter portions of phage lambda.
[168] The nucleotide sequence of the present invention (prepared by site-directed mutagenesis, synthesis and other methods, etc.) may or may not include the nucleotide sequence encoding the signal peptide. When the polypeptide is secreted in the cell in which it is expressed, a signal peptide is present. If signal peptides are present, such signal peptides must be recognizable by the cell selected for polypeptide expression. The signal peptide may be homologous to the polypeptide (normally associated with huIFNG) or heterologous (obtained from a source other than huIFNG), or homologous or heterologous to the host cell, i.e., the signal peptide is normally expressed in the host cell. It may be a signal peptide (if homologous) or a peptide (if heterozygous) that is not normally expressed in the host cell. Thus, the signal peptide may be a prokaryotic peptide derived from a bacterium such as E. coli or a eukaryotic cellular peptide derived from a mammal or insect or yeast cell.
[169] The presence or absence of signal peptides may vary depending on whether the expression host cell used to produce the polypeptide, the protein to be expressed (either intracellular or intercellular protein), or whether secretion is desired. If used on filamentous fungi, Asperhillus sp . Signal peptides are typically derived from a gene encoding amylase or glucoamylase or a gene encoding Rhizomucor miehei lipase or protease or a gene encoding Humicola lanuginosa lipase. The signal peptide is preferably derived from genes encoding A. oryzae TAKA amylase, A. niger neutral α-amylase, A.niger acid-stable amylase, A. niger glucoamylase. For use in insect cells, it is convenient to derive from the insect gene (WO90 / 05783), e.g. lepidopteran Manduca sexta adipocaine hormone precursor (US 5,023,328), bee melittin (Invitrogen), activator UDP glue Signal peptides were identified in rosyltransferase (egt) (Murphy et. Al. Protein Expression and Purification 4,349-357 (1993) or human pancreatic lipase (hpl) (Methods in Enzymology 284, pp. 262-272, 1997). Can be induced.
[170] Suitable signal peptides available for mammalian cells are huIFNG or murine Ig kappa light chain signal peptide (Coloma, M (1992) J. Imm. Methods 152: 89-104). Suitable for yeast cells, α-factor signal peptide of S. cereviciae (US 4,870,008), signal peptide of mouse saliva amylase (O. Hagenbuchle et al., Nature 289, 1981, pp. 643-646), modified carboxy Peptidase Signal Peptides (LA Valls et al., Cell 48, 1987, pp. 887-897), East BARl Signal Peptides (WO 87/02670), East Aspartic Protease 3 (YAP3) Signal Peptides (M. Egel-Mitani) et al., Yeast, 6, 1990, pp. 127-137) found the appropriate signal peptide.
[171] Any suitable host used to produce the IFNG polypeptide includes bacteria, fungi (including yeast), plants, insects, mammals or other suitable animal cells or cell lines, as well as transgenic animals or plants. Bacterial host cells include, for example, Gram positive bacteria such as Bacillus strains (ie, B. brevls, B. subtilis ) Pseudomonas or Streptomyces ; Gram-negative bacteria such as E. Coli . Protoplast transformation (Chang and Cohen, 1979, Molecular General Genetics 168: 111-115), using competent cells (Young and Spizizen, 1961, Journal of Bacteriology 81: 823-829, or Dubnau and Davidoff-Abelson, 1971, Journal of Molecular Biology 56: 209-221; Electroporation (Shigekawa and Dower, 1988, Biotechniques 6: 742-751); Conjugation (Koehler and Thome, 1987, Journal of Bacteriology 169: 5771-5278) and the like are methods used to introduce vectors into bacterial cells.
[172] Filamentous fungal cells include, for example, Aspergillus strains ( A. oryzae, A. niger, A. nidulane ), Fusarium or Trichoderma . Fungal cells can be transformed by a series of processes such as protoplast formation, protoplast transformation, cell wall regeneration, etc. by known methods. Suitable transformation procedures for Aspergillus host cells are described in EP 238 023 and US 5,679,543. Methods for transforming Fusarium species are described in Malardier et al., 1989, Gene 78: 147-156 and WO 96/0787. Becker and Guarente, In Abelson, JN and Simon, MI, edlitors, Guide to Yeast Genetics and Molecular Biology, Methods in Enzymology , Volume 194, pp 182-187, Academic Press, Inc., New York; Ito et al., 1983, Journal of Bacteriology 153: 163; Yeast is transformed using the process described in and Hinnen et al., 1978, Proceedings of the National Academy of Sciences USA 75: 1920.
[173] Suitable yeast cells include Saccharomyces species ( S. cerevisiae, Schizosaccharomyces ), Kluyvsromyces, Plchia ( P. pastoris, P. methanolica ), Hansenula ( H. Polymorpha ) or Yarrowia species. Methods for transforming yeast cells with heterologous DNA to produce heterologous polypeptides from yeast are described in Clontech Laboratories, Inc., Palo Alto, CA USA (protocol of the Yeastmaker ^™ Yeast Tranformation System Kit) and Reeves et. al., FEMS Microbiology Letters 99 (1992) 193-198, Manivasakam and Schies, Nucleic Acids Research, 1993, Vol. 21, No. 18, pp. 4414-4415 and Geneva et al., FEMS Microbiology Letters 121 (1994) 159-164.
[174] Suitable gonadotrophic host cells include, for example, Lepidoptora cell lines such as Spodoptera frugiperda (Sf9 or Sf21), Trichoplusioa ni cells (High Five) (US 5,077,214) and the like. Transformation of insect cells and production of heterologous polypeptides can be carried out as described in Invitrogen.
[175] Examples of suitable mammalian host cells include the Chinese Hamst Ovari (CHO) cell line (CHO.K1; ATCC CCL-61), the green monkey cell line (COS) (COS 1 (ATCC CRL-1650), COS 7 (ATCC CRL-). 1651)); Mouse cells (NS / O), Baby Hamster Kindney (BHK) cell line (ATCC CRL-1632 or ATCC CCL-10), human cells (HEK 293 (ATCC CRL-1573)) and plant cells in tissue cultures. . Another suitable cell line is known in the art and can be distributed from public deposits such as the American Type Culture Collection, Rockville, Maryland. In addition, mammalian cells, such as CHO cells, are modified to express cyclyltransferases such as 1,6-cyaryltransferase (US 5,047,335) to improve glycosylation of IFNG polypeptides.
[176] Calcium phosphate-mediated transfection, electroporation, DEAE-dextran mediated transfection, liposome-mediated transfection, viral vectors, methods described by Life Technologies Ltd, Paisley, UK using Lipofectamin 2000, and the like. It is a method used to introduce exogenous DNA into mammalian host cells. Such methods are already known in the art, and Ausber et. al. (eds.), 1996, Current Protocols in Molecular Biology, John Wiley & Sons, New York, USA. Culture of mammalian cells can be performed using established methods such as Animal Cell Biotechnology, Methods and Protocols, Edited by Nigel Jenkins, 1999, Human Press Inc, Totowa, New Jorsey, USA and Harrison MA and Rae IF, General Techniques of Cell Culture, This was done according to the method described in Cambridge University Press 1997.
[177] In order to produce glycosylated polypeptides, it is preferred to use eukaryotic host cells, for example the cells mentioned above.
[178] In the production method of the present invention, the cells were cultured in a nutrient medium suitable for producing the polypeptide using methods known in the art. For example, using flask shake culture, small scale or large scale culture (including continuous fermentation, batch, feed-batch, solid state fermentation, etc.), laboratory scale or industry in an appropriate medium under conditions under which the polypeptide can be expressed or separated. Cells can be cultured on a scale. Culture is carried out in a suitable nutrient medium consisting of carbon, nitrogen source, inorganic salts using methods known in the art. Appropriate media can be obtained from the supplier or prepared according to known compositions (see American Typer Culture Collection Catalog). Once the polypeptide is secreted into the nutrient medium, the polypeptide can be recovered directly from the medium. If the polypeptide is not secreted, it can be recovered from the cell lysate.
[179] The resulting polypeptide can be recovered using any method known in the art. For example, the polypeptide can be recovered from the nutrient medium using conventional procedures, including but not limited to centrifugation, filtration, extraction, spray drying, evaporation, precipitation, and the like.
[180] Polypeptides can be purified using a variety of methods known in the art, for example, chromatography (ion exchange chromatography, affinity chromatography. Hydrophobic chromatography, isoelectric focus chromatography), electrical processes (preliminary) Isoelectric point focus), use of differential solubility (eg, ammonium sulphate precipitation), SDS-PAGE or extraction (Protein Purification, JC Janson and Lars Ryden, editors, VCH Publishers, New York, 1989) It can be purified using. Particular methods for purifying polypeptides exhibiting IFNG activity are described in EP 110044 and also in Japanese patent application 186995/84 (unexamined).
[181] The biological activity of an IFNG polypeptide can be tested by any suitable method known in the art. Such tests include antibody neutralization of antiviral activity, protein kinase induction, oligoadenylate 2,5-A synthetase or phosphodiesterase activity (EP 41313 B1), and the like. Such tests include immunomodulation tests (US 4,753,795), growth inhibition tests, and measuring the extent of binding to cells expressing interferon receptors. Specific tests are described in the Materials and Methods section of this specification.
[182] In addition, the present invention relates to improving treatment methods such as interstitial lung disease, granulomatosis disease, cancer, infection, bone disease (bone metabolic diseases such as malignant osteoporosis) and autoimmune diseases such as rheumatoid arthritis. Is an effective treatment while reducing the frequency of invasive administration and reducing the risk of immune response to the therapeutically active ingredient.
[183] The conjugates of the present invention are preferably administered in a composition such as a pharmaceutically acceptable carrier or excipient. "Pharmaceutically acceptable" means a carrier or excipient that does not cause side effects in a patient receiving the composition. Such pharmaceutically acceptable carriers and excipients are known in the art (Remington's Pharmaceutical Sciences, 18th edition, AR Gennaro, Ed., Mack Publishing Company [1990]; Pharmaceutical Formulation Development of Peptides and Proteins, s. Frokjaer and K. Hovgaard, Eds., Taylor% Francis [2000]; and Handbook of Pharmaceutical Excipients, 3rd edition, A. Kibbe, Ed., Pharmaceutical Press [2000]).
[184] The conjugates of the present invention can be used in the form of circles and salts. Suitable salts include, but are not limited to, alkali or alkaline earth metals such as sodium, potassium, calcium, magnesium and zinc salts. Such salts or complexes exist in crystalline or amorphous structures.
[185] The conjugates of the present invention may be administered in dosages similar to those used for treatment, as mentioned in the known commercially available IFNG, Actimmune or EP 795332. The exact dosage to be administered depends on the environment. Normally, the dosage should be able to prevent or alleviate the symptoms of the condition being treated. The effective amount of the conjugate or composition of the present invention depends on the disease, dosage, schedule of administration, and also depends on whether the polypeptide is administered alone or in combination with other therapeutic agents, and the serum half-life of the composition and the general health of the patient. .
[186] The invention also provides a) a conjugate consisting of at least one non-polypeptide moiety that covalently binds to an IFNG polypeptide, wherein the IFNG polypeptide is huIFNG, rhuIFNG or the IFNG polypeptide described herein (conjugate of the invention); b) pharmaceutical compositions for treating diseases, such as interstitial lung diseases, cancer, infections, bone diseases (bone metabolic diseases such as malignant osteoporosis), inflammatory diseases, in particular interstitial lung diseases, in most cases idiopathic lungs Fibrosis and the like relate to therapeutic pharmaceutical compositions or treatment kits. Glucocorticoids such as predinison may also be included. Appropriate doses will be between 1 and 4 μg / kg polypeptide, more preferably between 2 and 3 μg / kg polypeptide per patient. More suitable dosages are 100-350 μg / kg glucocorticoids, more preferably 100-150 μg / kg glucocorticoids.
[187] Improved means of transporting molecules or preparations that optionally include glucocorticoids are also described.
[188] The present invention also provides a kit suitable for treating interstitial pulmonary disease, the kit comprising: a) a first pharmaceutical composition consisting of the active ingredient b) a second pharmaceutical composition comprising the aforementioned or at least one glucocorticoid It consists of. Wherein each component is optionally provided with a pharmaceutically acceptable carrier or excipient.
[189] The conjugates of the present invention are formulated into pharmaceutical compositions using known methods. Suitable preparation methods are described in Remington's Pharmaceutical Sciences (E.W.Martin) and US 5,183,746.
[190] Pharmaceutical compositions can be formulated in a variety of forms, for example, liquid, gel, freeze-dried, powder, compressed solid or any other suitable zero. Appropriate form depends on the disease to be treated, but will be apparent to those skilled in the art.
[191] The pharmaceutical composition may be administered by oral cavity, subcutaneous, intravenous, brain, nasal, transdermal, peritoneal, muscle, lung, vaginal, rectal, ocular or the like or using any other suitable method such as PowderJect or ProLease technology. . The composition may be administered continuously via infusion, but pill infusion is also possible using methods (pumps or implants) known in the art. In some cases, the composition may be provided directly as a solution or spray. Appropriate dosage forms will vary depending on the particular disease being treated, but are known in the art.
[192] The pharmaceutical composition of the present invention can be administered in combination with other therapeutic agents. Such materials may be included in part of the same pharmaceutical composition or administered separately from the polypeptides or conjugates of the invention. In addition, the polypeptides, conjugates or pharmaceutical compositions of the invention may be used as an adjuvant in other therapies. In particular, complexes with glucocorticoids as described in EP 795332 can also be considered.
[193] Parenteral (extraintestinal) administration
[194] Pharmaceutical compositions can be, for example, solutions for the purpose of extra-intestinal administration. In most cases, the pharmaceutical solution phase composition may be readily available in liquid form, and such extratracheal compositions may be provided in frozen or lyophilized form. In the case described above, the composition is thawed before use. The latter case is used when one wishes to enhance the stability of the active compound included in the composition under various storage conditions, and those skilled in the art will appreciate that the lyophilized preparation is generally more stable than the liquid phase. Such lyophilized preparations are reconstituted by adding one or more suitable pharmaceutically acceptable diluents such as sterile water for injection or sterile physiological salt solution.
[195] In the case of extra-intestinal administration, in the preparation of a lyophilized composition or aqueous solution for storage, one or more pharmaceutically acceptable carriers, excipients or stabilizers (collectively all used in the art) And excipients include buffers, stabilizers, preservatives, isotonic solutions, non-ionic surfactants, antioxidants or other additives.
[196] It is a buffer that helps to adjust the pH within a range close to physiological conditions. It generally has a concentration range of 2 mM to 50 mM. Suitable buffers for use in the present invention include organic and inorganic acids and salts thereof, for example citrate buffers (e.g. monosodium citrate, disodium citrate mixtures, citric acid-citrate trisodium mixtures, citric acid-citric acid monosodium mixtures). ), Succinic acid buffer (e.g., succinic acid-sodium citrate mixture, succinic acid-sodium hydroxide mixture, succinic acid-disodium succinate mixture, etc.), tartarate buffer (e.g., tartaric acid-sodium tartrate mixture, tartaric acid-potassium tartarate mixture, tin Acid salt-sodium hydroxide mixtures, etc., fumaric acid buffer solutions (e.g., fumaric acid-fumaric acid monosodium fumarate mixtures, fumaric acid-fumaric acid disodium mixtures, fumaric acid monosodium fumaric acid disodium mixtures, etc.), gluconate buffers (gluconic acid-glyconate mixtures) , Gluconic Acid-Sodium Hydroxide Mixture, Gluconic Acid-Glucoside Yate mixtures, etc.), oxalate buffers (e.g., oxalic acid-oxalate salt mixtures, oxalic acid-sodium hydroxide mixtures, oxalic acid-potassium oxalate mixtures, etc.), lactate buffers (e.g., lactic acid-sodium lactate mixtures, lactic acid-sodium hydroxide mixtures) , Lactic acid-potassium lactate mixtures, and the like, and acetate buffers (eg, acetic acid-sodium acetate mixtures, acetic acid-sodium hydroxide mixtures, etc.). Phosphate buffers, histidine buffers, trimethylamine salts such as Tris, and the like are also possible.
[197] Preservatives are added to retard the growth of microorganisms, typically 0.2% to 1% (w / v). Suitable preservatives for use in the present invention include phenol, benzyl alcohol, meta-cresol, methyl paraben, propyl paraben, octedecyldimethylbenzyl ammonium chloride, benzalkonium halide (e.g. benzalkonium chloride, benzalkonium bromide, benzyl iodide) Cornium), hexamethonium chloride, alkyl parabens such as methyl or propyl parabens, catechol, resorcinol, cyclonuxanol, and 3-pentanol.
[198] Isotonic solutions are added for isotonicity of the liquid composition, including polyhydric sugar alcohols, suitably trihydric or higher sugar alcohols such as glycerin, erythritol, arabitol, gyretol, sorbitol, mannitol, and the like. . The polyhydric alcohol is included in the range of 0.1% to 25wt%, generally 1% to 5% in consideration of the relative amount of the other components.
[199] Stabilizers refer to a wide range of excipients that function primarily as swelling agents, as additives to dissolve therapeutic agents, to prevent degeneration or to prevent adhesion to container walls. Alcohols (mentioned above); Amino acids such as arginine, lysine, glycine, glutamine, asparagine, histidine, alanine, omitin, L-leucine, 2-phenylalanine, glutamic acid and threonine; Organic sugars or sugar alcohols such as lactose, trehalose, stakiose, manditol, sorbitol, ziretol, myoinositol, galactitol, glycerol; Sugar alocol analogs such as cyclitol such as inositol; Polyethylene glycol; Amino acid polymers; Reducing substances including sulfur such as urea, glutathione, tiotic acid, thioglycolate sodium, thioglycerol, α-monothioglycerol and thiosulfate sodium; Low molecular weight polypeptides (eg, less than 10 amino acid residues); Proteins such as human serum albumin, bovine serum albumin, gelatin or immunoglobulins; Hydrophilic polymers such as polyvinylpyrrolidone; Monosaccharides such as gyrose, mannose, fructose, glucose; Disaccharides such as lactose, maltose and sucrose; Trisaccharides such as raffinose; Polysaccharides such as dextran. Generally, stabilizers are present in the range of 0.1 to 10,000 parts by weight based on the weight of the active protein.
[200] Non-ionic surfactants or surfactants (also known as wetting agents) assist in dissolving the therapeutic agent and agitate, thereby causing the composition to be exposed to shear surface stress without causing modification of the polypeptide. It can be added to protect. Suitable non-ionic surfactants include polyoleate (20, 80, etc.), polyoxamers (184, 188), Pluronic Polyols and polyoxyethylene sorbitan monoethers (Tween -20, Tween 80, etc.).
[201] Other additional excipients include swelling agents or fillers (eg, starches), chelating agents (EDTA), antioxidants (ascorbic acid, methionine, vitamin E), cosolvents, and the like. The active ingredient may also contain microcapsules (eg hydroxymethylcellulose, gelatin, poly- (methylmethacrylate) microcapsules) made using coacervation technology or an interfacial polymerization reaction; Colloidal drug delivery systems (liposomes, albumin vesicles, microemulsions, nanoparticles, nanocapsules) and macroemulsions can also be captured. See Remingtons' Pharmaceutical Science for such a technique.
[202] Extra- intestinal compositions used for in vivo administration must be sterile. It can be sterilized through filtration through sterile filtration membranes.
[203] Delayed release preparation
[204] Suitable examples of delayed release preparations include semipermeable matrices of solid hydrophobic polymers containing conjugates, matrices of the appropriate type such as films or microcapsules. Examples of delayed release matrices include polyesters, hydrogels (eg, poly (2-hydroxyethyl-methacrylate) or poly (vinyl alcohol)), polylactide, L-glutamic acid and ethyl-L-glutamate copolymers, Non-degradable ethylene-vinyl acetate, degradable lactic acid-glycolic acid copolymers such as Prolease technology or Lupron Depot (Injectable microspheres consisting of lactic acid-glycolic acid copolymer and roprolide acetate), poly-D-(-)-3-hydroxybutyl acid, and the like. Polymers such as ethylene-vinyl acetate and lactic acid-glycolic acid can release molecules for long periods of time up to 100 days or more, but certain hydrogels release proteins for shorter periods. Encapsulated polypeptides remain in the body for a long time, which are denatured or aggregated upon exposure to moisture at 37 ° C., resulting in loss of biological activity and altered immunogenicity. Depending on the mechanism involved, reasonable strategies should be devised for stabilization. For example, if a cohesion mechanism is found in which intermolecular SS bonds are formed through thio-disulfide interactions, the sulfahydryl moiety is modified, lyophilized with an acidic solution, water additives are adjusted with appropriate additives, Certain polymeric matrix compositions can be developed to achieve stabilization.
[205] Oral administration
[206] For oral administration, the pharmaceutical composition must be in solid or liquid form, for example in the form of capsules, tablets, suspensions, emulsions or solutions. Pharmaceutical compositions are suitably formulated in unit dosage forms containing a given amount of active ingredient. Appropriate daily dosages available to humans or other mammals can vary widely depending on the condition of the patient and other factors, but will be determined by those skilled in the art using conventional methods.
[207] Solid dosage forms for oral administration include capsules, tablets, suppositories, powders, granules, and the like. In such solid dosage forms the active compound may be admixed with at least one inert diluent such as sucrose, lactose, starch and the like. Such dosage forms may include additional materials such as lubricants such as magnesium stearate. In the case of capsules, tablets and pills, the dosage form also includes a buffer. Tablets and pills may be coated with enteric skin.
[208] The binder may be mixed with an adjuvant, for example, lactose, sucrose, starch powder, alkanoic acid cellulose ester, stearic acid, talc, magnesium stearate, magnesium oxide, phosphoric acid and sodium sulfate and calcium salts, acacia Gelatin, sodium alginate, polyvinyl-pyrrolidone or polyvinyl alcohol may be mixed and, for conventional administration, made into tablets or encapsulated. Alternatively, it may be dissolved in salt, water, polyethylene glycol, propylene glycol, ethanol, oil (corn oil, peanut oil, cottonseed oil, sesame oil), tracatan gum or various buffers. Carriers or diluents include time delay materials such as glyceryl monostearate, glyceryl distearate, which may be used alone or in admixture with waxes or other known materials.
[209] The pharmaceutical composition undergoes conventional pharmaceutical operations, such as stabilization reactions, and may include conventional adjuvant such as preservatives, stabilizers, wetting agents, emulsifiers, buffers, fillers and the like.
[210] Liquid dosage forms for oral administration include pharmaceutically acceptable emulsions, solutions, suspensions, syrups, pensions liquids, including inert diluents commonly used in the art, ie, water. Such compositions may also include adjuvant such as wetting agents, sweetening agents, flavoring and fragrances and the like.
[211] Topical administration
[212] Formulations for topical administration include liquid or semi-liquid preparations (eg, applied medications, lotions, ointments, creams, plasters) that can penetrate the skin or are suitable for administration to the eyes, ears, or nose.
[213] Transport by lung
[214] Compositions suitable for using nebulizers using jets or ultrasound consist of polypeptides or conjugates dissolved in water at a concentration of about 0.01-25 mg / ml per ml of solution. At this time, the appropriate concentration is about 0.1-10 mg / ml. The compositions may also include buffers, simple sugars (eg, sugars to stabilize proteins and control osmotic pressure), 0.1-10 mg / ml human serum albumin. Buffers that may be used include acetate sodium, citrate and glycine. Suitably the buffer also has a molarity suitable for adjusting the pH of the solution in the range of 3 to 9 with the composition. Generally buffers in the molar range of 1 mM to 50 mM are suitable for this purpose. Sugars that may be used for stabilization include maltose, lactose, mannitol, sorbitol, trehalose, gyrose and the like, in amounts ranging from 1% to 10% by weight of the composition.
[215] The nebulizer composition may also contain a surfactant to form aerosols to reduce or prevent surface aggregation of the protein upon atomization of the solution. Typically various surfactants may be used, for example polyoxyethylene fatty acid esters, alcohols and polyoxyethylene sorbitan fatty acid esters and the like. The amount generally ranges from 0.001% to 4% of the weight of the composition. Particularly suitable surfactants for the purposes of the present invention are polyoxyethylene sorbitan monooleates.
[216] Methods and specific compositions for making suitable liquid particle dispersions of the present invention are described in WO94 / 20069, US5,915,378, US5,960,792, US5,957,124, US5,934,272, US 5,915,378, US 5,855,564, US 5,826,570, US 5,522,385.
[217] Compositions that can be used in a given dose of inhalation device generally consist of finely divided powders. Such powders may be made by lyophilizing and then pulverizing the liquid conjugate composition, which may include stabilizers such as human serum albumin (HSA). Generally more than 0.5% (w / w) HSA is added. In addition, one or more sugars or sugar alcohols are added to the preparation as needed. Sugars or sugar alcohols include lactose, maltose, mannitol, sorbitol, sorbitol, trehalose, xylitol, xylose and the like. The amount added to the composition is in the range of 0.01 to 200% (w / w), suitably about 1 to 50% of the conjugate present. This preparation is lyophilized and ground to the desired particle size.
[218] Appropriately sized particles are then suspended in a propellant with the aid of a surfactant. Propellants can be any conventional materials used for this purpose, for example chlorofluorocarbons, hydrochlorofluorocarbons, hydrofluorocarbons or trichlorofluoromethane, dichlorodifluoromethane, dichlorotetra Hydrocarbons including fluoroethanol, 1,1,1,2-tetrafloorethane or a combination thereof. Suitable surfactants include sorbitan treoleate, soy lecithin and the like. Oleic acid may also be useful as a surfactant. This mixture is then added to the conveying device. An inhaler that provides a suitable commercially available dose amount available for the purposes of the present invention is Ventolin supplied by Glaxo Inc., Research Triangle Park, N.C.
[219] Formulations for powder inhalers include finely ground dry powder comprising a conjugate, such that an amount of swelling agent such as lactose, sorbitol, sucrose or mannitol can disperse the powder from the device, for example 50% of the weight. To 90%. The powder particles have an average diameter of about 10 μm, suitably 0.5 to 5 μm, most suitably 1.5 to 3.5 μm, and may have motility in the lungs corresponding to particles having a density of 1 g / cm 2. Powder inhalers that can be used in accordance with the techniques described herein include Spinhaler from Fisons Corp., Bedford, Mass.
[220] Such device powders can be made and transported by the methods described in US 5,997,848, US 5,993,783, US 5,985,248, US 5,976,574, US 5,922,354, US 5,785,049, US 5,654,007.
[221] Mechanical devices designed to deliver therapeutic products to the lungs include, but are not limited to, nebulizers, prescribed dose inhalers, powder inhalers, and the like, all of which are well known to those skilled in the art. Commercially available devices suitable for practicing the present invention include Mallinckrodt, Inc., St. Ultravent Nebulizers supplied by Louis, Missouri .; Acorn II Nebulizers supplied by Marquest Medical Procucts, Englewood, Colorado; Ventolin metered dose inhaler supplied by Glaxo Inc., Research Triangle Park, North Carolina; Spinhaler powder inhaler supplied by Fision Corp., Bedfor, Massachusetts; "Standing cloud" supplied by Inhale Therapeutic Systems, Inc., San Carlos, California; AIR inhalers supplied by Alkermes, Cambridge, Massachusetts; Systems to deliver drugs to AERx lungs from Aradigm Corporation, Hayward, California.
[222] The present invention treats autoimmune diseases such as bacterial, viral infections, cancers, tumors, interstitial lung diseases such as idiopathic pulmonary fibrosis, granulomatosis diseases, bone diseases (eg bone metabolic diseases such as malignant osteoporosis), rheumatoid arthritis The composition and its method are provided.
[223] In another aspect, the invention relates to a method of treating a mammal having a circulating antibody against huIFNG or rhuIFNG, which method comprises administering a compound that has IFNG bioactivity and does not react with such an antibody. do. The compound is suitably the conjugate described herein and the mammal is a human. The mammal to be treated has a disease, which is useful for treating this disease. At this time, a compound having IFNG bioactivity but not reacting with its antibody is made into a preparation for injection or any other suitable form. "Circulating antibody" refers to an autoantibody formed in a mammal in response to treatment with a commercially available IFNG preparation.
[224] It is also contemplated to use nucleotides encoding the IFNG polypeptide of the invention when used in gene therapy. Of particular interest is the use of nucleotides encoding the IFNG polypeptides described in the paragraph “Glycosylated Polypeptides of the Invention Modified to Bind to Additional Glycosylation Sites”. Thus, glycosylation of the polypeptide can be obtained during gene therapy, i.e., after the nucleotide sequence is expressed in the human body.
[225] Gene therapies to be considered include treating the disease, in which the polypeptide is expected to provide an effective treatment.
[226] Gene therapy can be used to deliver IFNG locally to provide therapeutic agents at the target site and to avoid potential toxicity issues associated with non-specific administration.
[227] Considered for in vitro and in vivo gene therapy.
[228] Several methods of transporting potential therapeutic genes to a defined cell population are known. See Mulligan, "The Basic Science Of Gene Therapy", Science, 260, pp. 926-31 (1993), these methods include:
[229] Methods for Direct Gene Delivery—Wolff et al., “Direct Gene transfer Into Mouse Muscle In vivo”, Science 247, pp. As described in 1465-68 (1990);
[230] Liposome-mediated delivery of DNA-Caplen et al., "Liposomemediated CFTR Gene Transfer to the Nasal Epithelium Of Patients With Cystic Fibrosis" Nature Med., 3, pp. 39-46 (1995); Crystal, "The Gene As A Drug", Nature Med., 1, pp. 15-17 (1995); Gao and Huang, "A Novel Cationic Liposome Reagent For Efficient Transfection of Mammalian Cells" Biochem. Biophys Res. Comm., 179, pp. 280-85 (1991);
[231] Retrovirus-Mediated DNA Delivery Methods-Kay et al., "In vivo Gene Therapy of Hemophills B: Sustained Partial Correction In Factor VII-Deficient Dogs", Science, 262, pp. 117-19 (1993); Anderson, "Human Gene Therapy", Science, 256, pp. 808-13 (1992); And
[232] DNA virus-mediated delivery of DNA. Such DNA viruses include adenoviruses (appropriately Ad-2 or Ad-5-based vectors), herpes viruses (appropriately the harpy simplex vector), parvoviruses (appropriately "defective" or non-spontaneous). Parvovirus vectors, more suitably adeno-associated viral vectors, most suitably AAV-2 vectors (Ali et al., "The Use Of DNA Viruses as Vectors for Gene Therapy", Gene Therapy, 1, pp. 367-84 (1994); US 4,797,368, and US 5,139,941).
[233] The invention is further described in the following examples. The examples are not to be understood in any way as limiting the overview of the specification and claims.
[234] Materials and methods
[235] inspection
[236] Overview of Interferon Test
[237] As already disclosed, IFNG interacts with IFNG receptors on HeLa cells to activate the receptors. As a result, transcription is activated in a promoter comprising a reactive element (ISRE) stimulated with interferon. Thus, screening for agonists of interferon receptors is possible using the ISRE-coupled luciferase reporter gene (ISRE-luc) located in HeLa cells.
[238] 1st inspection
[239] HeLa cells can be co-transformed with ISRE-Luc and pCDNA 3.1 / hygro and selected in DMEM medium containing hygromycin B to obtain transformed cell clones. Cellular clones can be screened using luciferase activity in the presence and absence of IFNG. Cell clones with the highest ratio of stimulated luciferase activity relative to unstimulated luciferase activity were used for further testing.
[240] To select muteins, 15,000 cells per well were inoculated on 96 well culture plates and incubated overnight in DMEM medium. The next day the mutein as well as the standard were added to the cells at various concentrations. The plates were incubated for 6 hours at 37 ° C. under 5% CO ₂ atmosphere. Successively LucLite substrate (Packard Bioscience, Groningen The Netherlands) was added to each well. The plate was sealed and luminescence was measured by SPC method (single photon count method) on a TopCount Luminometer (Packard). Individual plates have wells containing IFNG as a stimulated criterion and wells containing normal medium as a non-stimulated criterion. The ratio between stimulated luciferase activity and unstimulated luciferase activity is used as an internal criterion for mutein activity and interlaboratory variation.
[241] in vivoHalf-life of IFNG conjugates in the phase
[242] Methods for measuring biological half-life can be carried out in various ways as described in the literature. One method described by Rutenfranz et al. (J. Interferon Res. 1990, Vol. 10, p. 337-341) is the use of intravenous and intramuscular injection of IFNG into 8-week-old C57BL / 6 mice. Biological half-life was measured using Hep-2 cells and vesicle stomatitis virus (VVS), using a biological test to determine IFNG titers in murine serum. Alternatively, ELISA was used to detect IFNG in serum.
[243] Alternatively, radiolabeled IFNGs are used to study subcutaneous adsorption and local distribution of IFNGs. Croos and Roberts (J. Pharm., 1993, vol. 45, p. 606-609) studied ¹²⁵ IFNG in anesthetized female Spraque-Dawley rats. After subcutaneous administration, blood and tissue samples were collected to determine IFNG amounts by gamma-counting.
[244] PEGylation of IFNG
[245] PEGylated rhuIFNG was prepared in the manner described in Example 2 of US Pat. No. 5,109,120. Similarly, modified IFNG polypeptides with mutein N25K described herein were also PEGylated. The resulting PEG-IFNG-N25K conjugate has additional attached PEG molecules when compared to the rhuIFNG conjugate.
[246] Preparation of Pharmaceutical Compositions
[247] Purified conjugates related to injectable compositions can be prepared according to procedures known in the art to prepare pharmaceutical compositions for the treatment of interstitial lung disease, each vial containing 50 μg, 100 μg of a conjugate such as rhuIFNG or IFNG-N25K. , 200 μg, 300 μg, 400 μg, 500 μg amounts are included.
[248] Identification of surface exposed amino acid residues
[249] rescue
[250] Ealick et.al. Science 252: 698-702 (1991) reported on the experimental 3D structure of huIFNG identified by X-ray crystallography, for the C-alpha trace of IFNG homodimer. Walter et. al. Nature 376: 230-235 (1995) also reported on the IFNG homodimer structure having two molecules of the IFNG receptor in soluble form. Such structural coordinates are already known. Thiel at al., Structure 8: 927-937 (2000) describe an IFNG homodimer structure complexed with two molecules of IFNG soluble receptors with a third receptor molecule that does not interact with the IFNG homodimer in the structure. I reported it.
[251] Way
[252] Accessible Surface Area (ASA)
[253] Using the computer program Access (B. Lee and FMRichards, J. Mol. Biol. 55: 379-400 (1971)) version 2 (Copyright (c) 1983 Yale University), the accessible surface area of individual atoms in the structure ( ASA) was calculated. This method generally uses a 1.4 micron probe and is defined by the probe center to define the accessible surface area. Before performing this calculation, all water molecules, hydrogen atoms, and other atoms not directly related to the protein are removed from the coordinates.
[254] Fragment ASA of Side Chain
[255] The fragment ASA of the side chain can be calculated by dividing the ASA sum of the atoms in the side chain by the value representing the ASA of the side chain atom of each residue type in the extended ALA-x-ALA trivalent peptide (Hubbard, Campbell & Thornton (1991) J. Mol. Biol .: 220,507-530). For example, a CA atom is considered not part of the side chain of the glycine residue or part of the remaining residues. The following table uses 100% ASA criteria for the side chains;
[256] Ala 69.23Å ²
[257] Arg 200.35Å ²
[258] Asn 106.25Å ²
[259] Asp 102.06Å ²
[260] Cys 96.69Å ²
[261] Gln 104.58Å ²
[262] Glu 134.61Å
[263] Gly 32.28Å
[264] His 147.00Å
[265] Ile 137.91Å
[266] Leu 140.76Å
[267] Lys 162.50Å
[268] Met 156.08Å
[269] Phe 163.90Å
[270] Pro 119.65Å
[271] Ser 78.16Å
[272] Thr 101.67Å
[273] Trp 210.89Å
[274] Tyr 176.61Å
[275] Val 114.14Å
[276] Residues not detected in the structure are defined as 100% exposed because they reside in flexible parts.
[277] Measure distance between atoms
[278] InsightⅡ v. Calculate the distance between atoms using 98.0, MSI INC.'S molecular graphics software.
[279] Determining Receptor Binding Sites
[280] The receptor-binding site was defined as consisting of all residues with accessible surfaces that charge upon receptor binding. This is determined by at least two ASA calculations, one on the isolated ligand in the ligand / receptor complex and the other on the complete ligand / receptor complex.
[281] result
[282] The X-ray structure used is Thiel at al., Structure 8: 927-937 (2000), complexed with two molecules of IFNG-soluble receptors with a third molecule in the structure that do not interact with the IFNG homodimer in the structure. The structure of the IFNG homodimer that forms This structure consists of an IFNG homodimer, with the two molecules labeled A and B. For construction purposes, an additional methionine is located before the IFNG labeled MO, the sequence being C-terminally truncated to 10 residues (Q33 is the final residue of the truncated molecule). All calculations in the examples subtract MO from the structure. The two IFNG monomer structures have a very weak electron density after residue 120, but only modeled before residue T126. Thus, in this example residues S121-T126 are removed from the structure prior to calculation. Two receptor fragments labeled C and D were allowed to interact directly with the IFNG homodimer and the third receptor molecule labeled E was excluded from this calculation because it was not in contact with the IFNG homodimer.
[283] Surface exposure
[284] Except for M0 and S121-T126 in the two molecules A and B, fractional ASA calculations on homodimers of the molecules yield residues having at least 25% of these side chains exposed to the surface in at least one monomer. Is the same as; Q1, D2, P3, K6, E9, N10, K12, K13, Y14, N16, G18, H19, S20, D21, A23, D24, N25, G26, T27, G31, K34, N35, K37, E38, E39, S40, K55, K58, N59, K61, D62, D63, Q64, S65, Q67, K68, E71, T72, K74, E75, N78, V79, K80, N83, S84, N85, K86, K87, D90, E93, K94, N97, S99, T101, D102, L103, N104, H111, Q115, A118, E119.
[285] The following residues are those having at least 50% of the side chains exposed to the surface in at least one monomer; Q1, D2, P3, K6, E9, N10, K13, N16, G18, H19, S20, D21, A23, D24, N25, G26, T27, G31, K34, K37, E38, E39, K55, K58, N59, D62, Q64, S65, K68, E71, E75, N83, S84, K86, K87, K94, N97, S99, T101, D102, L103, N104, Q115, A118, E119.
[286] Performing fractional ASA calculations on homodimers of the molecules, including receptor molecules C and D, and excluding the M0 and S121-T126 in two molecules A and B, those exposed to the surface in at least one monomer Residues having at least 25% of the side chains are as follows; Q1, D2, P3, K6, E9, N10, K13, Y14, N16, G18, H19, D21, N25, G26, G31, K34, N35, K37, E38, E39, S40, K55, K58, N59, K61, D62, D63, Q64, S65, Q67, K68, E71, T72, K74, E75, N78, V79, K80, N83, S84, N85, K86, K87, D90, E93, K94, N97, S99, T101, D102, L103, N104, E110. The next residue is a residue having 50% of the amino acid side chains exposed to the surface in at least one monomer; P3, K6, N10, K13, N16, D21, N25, G26, G31, K34, K37, E38, E39, K55, K58, N59, D62, Q64, S65, K68, E71, E75, N83, S84, K86, K87, K94, N97, S99, T101, D102, L103, N104.
[287] All these positions are the target of the modifications according to the invention.
[288] Comparing the two lists, K12, S20, A23, D24, T27, H111, Q115, and A118 were removed from the 25% side chain ASA list upon receptor binding, and Q1, D2, E9, G18, H19, S20, A23, D24, T27, Q115, A118, E119 are removed.
[289] Residues not determined structurally include residues S121, P122, A123, A124, K125, T126, G127, K128, R129, K130, R131, S132, Q133, M134, L135, F136, R137, G138, R139, R140, A141, Treated as completely surface exposed, such as S142, Q143. These residues also constitute separate targets for introducing the attachment groups in accordance with the present invention (or appear to belong to a group at a surface exposed amino acid residue, such as having at least 25% or at least 50% of the exposed side chains).
[290] Receptor binding site
[291] ASA calculations as described above resulted in a decrease in ASA at the next residue in the IFNG molecule at at least one monomer in the complex as compared to that calculated at the isolated dimer; Q1, D2, Y4, V5, E9, K12, G18, H19, S20, D21, V22, A23, D24, N25, G26, T27, L30, K34, K108, H111, E112, I114, Q115, A118, E119.
[292] Example 1
[293] Design of Expression Cassette to Express IFNG in Yeast and CHO Cells
[294] For significant expression in yeast cells, the DNA sequence (GenBank expression number X13274) containing the full-length cDNA encoding the complete huIFNG was modified without native signal peptide. First, the MATa signal peptide was introduced in place of IFNG to allow secretion into yeast medium. Second, codons of huIFNG nucleotides were modified to bias codon usage for use towards codons frequently used in yeast. As a result, in order to introduce a restriction enzyme recognition site for the DNA restriction enzyme, certain nucleotides in the sequence were substituted with another. Primers were designed to allow genes to be synthesized. Primers were assembled into synthesized genes using one-step PCR and PCR cycling parameters using the Platinum Pfx kit (Life Technologies). Amplify the assembled gene by PCR using the same conditions, the gene has the sequence in SEQ ID NO 3. The synthesized gene was cloned into pJSO37-lip (Okkels, JS (1996) Rec. DNA Biotech. III, vol 782, 202-207) at the HindIII site at the 5 'end and at the XbaI site at the 3' end to obtain pIGY-1. .
[295] To construct a side chain structure comprising covalently linked monomeric IFNG polypeptides, the following three constructs were made;
[296] I) structure 1; Two full-length huIFNG polypeptides modeled on the human IgA1 hinge portion (Lunn CA et.al., J. Biol. Chem., 267, 17920-17924, 1992), wherein the two polypeptides are linked by a 19mer linker peptide . PCR using the following primers
[297] ADJ0025'-GGTTTGATATCGATGGCCAA-3 '(SEQ ID NO 4)
[298] ADJ0035'-GCGGCCCTCTAGATTACT-3 '(SEQ ID NO 5)
[299] ADJ0045'-CATCTCCGTCCACTCCGACTCCATAGCATGCAAGATCCATATGTGA
[300] AAGAA-3 '(SEQ ID NO 6)
[301] ADJ0075'-ATCTTGCATGCTATGGAGTCGGAGTGGACGGAGATGGAGTTGGC
[302] GGAGTAGAAGGAACCGCTGTTTTAGCAGCTGGAGACAATT-3 '(SEQ ID NO 7)
[303] PCR fragments were cloned between the 5 ′ end ClaI position of pIGY-1 and the 3 ′ end X baI where the monomers were assembled in SphI (introduced in the linker moiety). This structure is called pIGY-2.
[304] II). Structure 2; A structure comprising a full length huIFNG polypeptide of two monomers without a linker. The following primers are used for PCR.
[305] ADJ0025'-GGTTTGATATCGATGGCCAA-3 '(SEQ ID NO 8)
[306] ADJ0035'-GCGGCCCTCTAGATTACT-3 '(SEQ ID NO 9)
[307] ADJ0065'-TTTAGAGGTAGAAGAGCTTCTCAGCAAGATCCATATGTGAAAGAAGCT
[308] -3 '(SEQ ID NO 10)
[309] ADJ0095'-AGCTTCTTTCACATATGGATCTTGCTGAGAAGCTCTTCTAGGTCTAAA-3 '
[310] (SEQ ID NO 11)
[311] The PCR fragment was assembled using two-step PCR to clone between the Cla I position of the 5 'end of pIGY-1 and the Xba I of the 3' end, which is called pIGY-3.
[312] III). Construct 3. Two C-terminal truncated (at least 11 amino acids) monomeric IFNG polypeptides covalently linked via the 19-mer linker described above. The following polypeptides are used.
[313] ADJ0015'-TGCTCTAGACATCTGAGATCGTTTTCTCTTTCC-3 '(SEQ ID NO 2)
[314] ADJ0025'-GGTTTGATATCGATGGCCAA-3 '(SEQ ID NO 13)
[315] ADJ0045'-CATCTCCGTCCACTCCGACTCCATAGCATGCAAGATCCATATGTGAAAGAA-3 '
[316] (SEQ ID NO 14)
[317] ADJ0055'-ATTCTTGCATGCTATGGAGTCGGAGTGGACGGAGATGGAGTT
[318] GGCGGAGTAGAAGGAACCGGCATCTGAGATCTTTTTCTCC-3 '(SEQ ID NO 15)
[319] PCR fragments were cloned between the 5 ′ end ClaI position and 3 ′ end X baI of pIGY-1 that assembled the monomers in SphI (introduced into the linker moiety). This structure is called pIGY-4.
[320] Construct for Expression in CHO Cells
[321] To express IFNG in CHO cells, the following oligonucleotides are synthesized so that IFNG comprising the signal peptide can be cloned into pcDNA3.1 / hygro (Invitrogen).
[322] ADJ012
[323] 5'-CGCGGATCCATGAAATATACAAGTTATATCTTGGCTTTTCAGCTCTGCATCGTTTT
[324] GGGTTCTCTTGGCTGTTACTGCCAAGATCCATATGTGAAAGAAGCT-3 '(SEQ ID NO 16)
[325] In order to clone IFNG to this expression vector, using ADJ012 and ADJ003, pIGY-1 as a template, PCR amplification, the position between the 5 'end BamH I and the 3' end Xba I of pcDNA3.1 / hygro A 450 bp fragment is produced that can be cloned into, and the clone product is called pIGY-5.
[326] To introduce a glycosylation site into IFNG, an oligonucleotide was designed to clone the PCR fragment at the position between the traditional two-step PCR reaction and the 5 'end BamH I and the 3' end Xba I, resulting in a change in PCR expression vector. Oligonucleotides were designed to be introduced into (pIGY03).
[327] Thus, two vector primers were designed to utilize specific mutant primers; ADJ0135'-GATGGCTGGCAACTAGAAG-3 '(SEQ ID NO 17)
[328] ADJ1045'-TGTACGGTGGGAGGTCTAT-3 '(SEQ ID NO 18)
[329] To make different mutations, the following primers were designed;
[330] K12T
[331] ADJ0155'-AGCATTAAAATACTTCGTCAAGTTTTCAGC-3 '(SEQ ID NO 19)
[332] ADJ0165'-GCTGAAAACTTGACGAAGTATTTTAATGCT-3 '(SEQ IN NO 20)
[333] G18T
[334] ADJ0175'-CACATCAGAATGAGTAGCATTAAAATA-3 '(SEQ ID NO 21)
[335] ADJ0185'-TATTTTAATGCTACTCATTCTGATGTG-3 '(SEQ ID NO 22)
[336] E38N
[337] ADJ0195'-CATAATTTTTCGATCGGATTCGTTTTTCCAATTCTT-3 '(SEQ ID NO23)
[338] ADJ0205'-AAGAATTGGAAAAACGAATCCGATCGAAAAATTATG-3 '(SEQ ID NO 24)
[339] K61T
[340] ADJ021 5'-AATAGACTGATCGTCTGTAAAGTTTTTAAA-3 '(SEQ ID NO 25)
[341] ADJ0225'-TTTAAAAACTTTACAGACGATCAGTCTATT-3 '(SEQ ID NO 26)
[342] N85T
[343] ADJ0235'-TCTTTTCTTTTTAGTACTATTGAAAAACTT-3 '(SEQ ID NO 27)
[344] ADJ0245'-AAGTTTTTCAATAGTACTAAAAAGAAAAGA-3 '(SEQ ID NO 28)
[345] K94N
[346] ADJ0255'-ATAATTAGTCAAATTTTCGAAGTCATG-3 '(SEQ ID NO 29)
[347] ADJ0265'-GATGACTTCGAAAATTTGACTAATTAT-3 '(SEQ ID NO 30)
[348] 299N
[349] ADJ0275'-AATCAAGTCAGTAACGTTATAATTAGTCAA-3 '(SEQ ID NO 31)
[350] ADJ0285'-TTGACTAATTATAACGTTACTGACTTGAAT-3 '(SEQ ID NO 32)
[351] Q106T
[352] ADJ0295'-ATGAATAGCTTTACTAGTCACATTCAAGTC-3 '(SEQ ID NO 33)
[353] ADJ0305'-GACTTGAATGTGACTAGTAAAGCTATTCAT-3 '(SEQ ID NO 34)
[354] Two-step PCR and cleavage of these primer pairs with BamH I and Xba I, respectively, yielded a 447 bp fragment that could be cloned into pIGY-5.
[355] Interferon gamma expression in CHO cells
[356] The above-mentioned construct is transfected with the CHO K1 cell line (ATCC # CCL-61), and the transfection material used is Lipofectamine 2000 (Life Technologies, USA). After 24 hours, culture medium was obtained and examined for interferon gamma activity and concentration.

权利要求:
Claims (35)
[1" claim-type="Currently amended] In a conjugate consisting of at least one non-polypeptide moiety that exhibits IFNG activity and is covalently attached to an IFNG polypeptide, the polypeptide consists of an amino acid sequence that is different from the parent IFNG polypeptide, but differs in that it consists of an attachment for a non-polypeptide moiety. Conjugates having at least one translocation or one insertion amino acid residue.
[2" claim-type="Currently amended] 2. The conjugate of claim 1, wherein the parental IFNG polypeptide is a wild type human IFNG (huIFNG) or variant thereof or fragment thereof.
[3" claim-type="Currently amended] 3. The conjugate of claim 1 or 2, wherein the first non-polypeptide moiety is selected from polymers, lipophilic compounds, sugar moieties, and organic derived materials.
[4" claim-type="Currently amended] 4. The conjugate of claim 1, wherein the amino acid residue consisting of the attachment group for the non-polypeptide moiety is introduced or removed at a position in the huIFNG occupied by the surface exposed amino acid residue.
[5" claim-type="Currently amended] 5. The conjugate of claim 4, wherein the amino acid residue consisting of the attachment group for the non-polypeptide moiety is introduced or removed at a position in the huIFNG occupied by an amino acid residue consisting of at least 25% of the amino acid side chains being surface exposed.
[6" claim-type="Currently amended] 5. The conjugate of claim 4, wherein the amino acid residue consisting of the attachment group for the non-polypeptide moiety is introduced or removed at a position in the huIFNG occupied by an amino acid residue consisting of at least 50% of the amino acid side chains being surface exposed.
[7" claim-type="Currently amended] The conjugate according to any one of claims 3 to 6, wherein the first non-polypeptide moiety is a sugar moiety.
[8" claim-type="Currently amended] 8. The conjugate of claim 7, wherein the sugar moiety is an N-linked sugar moiety and the IFNG polypeptide consists of an N-glycosylated site with at least one removed or introduced as compared to the parent polypeptide.
[9" claim-type="Currently amended] 9. The conjugate of claim 8, wherein the IFNG polypeptide consists of at least one mutation selected from the following.
Q1N + P3S / T, P3N + V5S / T, K6N + A8S / T, E9N + L11S / T, K12S / T, K13N + F15S / T, Y14N + N16S / T, G18S / T, G18N, G18N + S20T, H19N + D21S / T, D21N + A23S / T, G26N + L28S / T, G31N + L33S / T, K34N + W36S / T, K37S / T, K37N + E39S / T, E38N, E38N + S40T, E39N + D41S / T, S40N + R42S / T, K55N + F57S / T, K58N + F60S / T, K61S / T, K61N + D63S / T, D62N + Q64S / T, D63N, D63N + S65T, Q64N + I66S / T, S65N + Q67S / T, Q67N, Q67N + S69T, K68N + V70S / T, E71N + I73S / T, T72N + K74S / T, K74N + D76S / T, E75N + M77S / T, K80S / T, V79N + F81S / T, K80N + F82S / T, N85S / T, S84N + K86S / T, K87S / T, K86N + K88S / T, K87N + R89S / T, D90N + F92S / T, E93N + L95S / T, K94N, K94N + T96S, S99N, S99N + T101S, T101N + L103S / T, D102N + N104S / T, L103N + V105S / T, Q106S / T, E119N, E119N + S121T, P122N + A124S / T, A123N + K125S / T, A124N, A124N + T126S, K125N + G127S / T, T126N + K128S / T, G127N + R129S / T, K128N + K130S / T, R129N + R131S / T, K130N, K130N + S132T, R131N + Q133S / T, S132N + M134S / T, Q133N + L135S / T, M134N + F136S / T, L135N + R137S / T, F136N + G138S / T, R137N + R139S / T, G138N + R140S / T, R139N + A141S / T, R140N, R140N + S142T.
At this time, the substituents are shown for huIFNG having amino acids found in SEQ ID NO 2.
[10" claim-type="Currently amended] 10. The conjugate of claim 9, wherein the IFNG polypeptide consists of at least one substituent selected from:
P3N + V5S / T, K6N + A8S / T, E9N + L11S / T, K12S / T, K13N + F15S / T, Y14N + N16S / T, G18S / T, G18N, G18N + S20T, H19N + D21S / T, D21N + A23S / T, G26N + L28S / T, G31N + L33S / T, K34N + W36S / T, K37S / T, K37N + E39S / T, E38N, E38N + S40T, E39N + D41S / T, S40N + R42S / T, K55N + F57S / T, K58N + F60S / T, K61S / T, K61N + D63S / T, D62N + Q64S / T, D63N, D63N + S65T, Q64N + I66S / T, S65N + Q67S / T, Q67N, Q67N + S69T, K68N + V70S / T, E71N + I73S / T, T72N + K74S / T, K74N + D76S / T, E75N + M77S / T, K80S / T, V79N + F81S / T, K80N + F82S / T, N85S / T, S84N + K86S / T, K87S / T, K86N + K88S / T, K87N + R89S / T, D90N + F92S / T, E93N + L95S / T, K94N, K94N + T96S, S99N, S99N + T101S, T101N + L103S / T, D102N + N104S / T, L103N + V105S / T, Q106S / T, E119N, E119N + S121T, P122N + A124S / T, A123N + K125S / T, A124N, A124N + T126S, K125N + G127S / T, T126N + K128S / T, G127N + R129S / T, K128N + K130S / T, R129N + R131S / T, K130N, K130N + S132T, R131N + Q133S / T, S132N + M134S / T, Q133N + L135S / T, M134N + F136S / T, L135N + R137S / T, F136N + G138S / T, R137N + R139S / T, G138N + R140S / T, R139N + A141S / T, R140N, R140N + S142T.
At this time, the substituents are shown for huIFNG having amino acids found in SEQ ID NO 2.
[11" claim-type="Currently amended] The conjugate of any one of claims 8 to 10, wherein the IFNG polypeptide consists of at least one substituent selected from:
K12S / T, G18S / T, E38N, K61S / T, N85S / T, K94N, S99N, Q106S / T, A124N, K130N, R140N, especially E38N, K94N, S99N, A124N, K130N, R104N.
[12" claim-type="Currently amended] 12. The conjugate of any one of claims 7-11, wherein the conjugate consists of at least one second non-polypeptide moiety.
[13" claim-type="Currently amended] 13. The conjugate of claim 12, wherein the second non-polypeptide moiety is a polymer.
[14" claim-type="Currently amended] 14. A polypeptide according to claim 12 or 13, wherein the polypeptide has an amino acid sequence different from the parent polypeptide, ie at least one introduced or deleted amino acid residue composed of an attachment group for the second non-polypeptide moiety. Conjugate.
[15" claim-type="Currently amended] The conjugate of any one of claims 1 to 6, wherein the first non-polypeptide moiety is a polymer.
[16" claim-type="Currently amended] The conjugate according to any one of claims 13 to 15, wherein the polymer is a straight or branched polyethylene glycol.
[17" claim-type="Currently amended] The conjugate according to any one of claims 12 to 16, wherein the amino acid residue consisting of a group for attachment to the polymer is composed of cysteine, lysine, aspartic acid and glutamic acid.
[18" claim-type="Currently amended] 18. The conjugate of any one of claims 15-17, wherein the non-polypeptide has a cysteine as an attachment group, wherein at least one cysteine residue is introduced into a position in huIFNG occupied by an amino acid residue exposed on the surface.
[19" claim-type="Currently amended] The non-polypeptide of claim 15, wherein the non-polypeptide has a lysine as an attachment group, wherein at least one lysine residue is removed and the lysine residue is K6, K12, K13, K34, K37, K43, K55, K61, A conjugate characterized by being substituted with a substituent selected from K68, K74, K80, K86, K87, K88, K94, K108, K125, K128, K130 (numbers are assigned based on SEQ ID NO 2).
[20" claim-type="Currently amended] 20. The conjugate of claim 19, wherein the lysine to be removed is K12, K34, K37, K108, K128, K130.
[21" claim-type="Currently amended] 21. The conjugate of any one of claims 1-20, wherein the IFNG polypeptide is truncated at the C-terminal end.
[22" claim-type="Currently amended] 22. The conjugate of any one of the preceding claims, wherein the IFNG polypeptide is a single chain IFNG polypeptide.
[23" claim-type="Currently amended] A conjugate characterized by exhibiting IFNG activity consisting of at least one N-terminal PEGylated IFNG polypeptide.
[24" claim-type="Currently amended] The conjugate of claim 23, wherein the IFNG polypeptide is huIFNG or a variant or fragment thereof.
[25" claim-type="Currently amended] The conjugate according to any one of the preceding claims, wherein the half-life is increased in functional in vivo when compared to huIFNG.
[26" claim-type="Currently amended] A nucleotide encoding a polypeptide portion of a conjugate according to any one of claims 1 to 25.
[27" claim-type="Currently amended] An expression vector comprising the nucleotide sequence of claim 26.
[28" claim-type="Currently amended] A host cell comprising the nucleotide sequence according to claim 26 or the expression vector according to claim 27.
[29" claim-type="Currently amended] 29. The host cell of claim 28, wherein the host is a yeast, E. coli , CHO, BHK, HEK293, SF9 cell.
[30" claim-type="Currently amended] A method of increasing the in vivo functional half-life of an IFNG polypeptide, the method comprising introducing or removing amino acid residues constituting an attachment group for a non-polypeptide moiety to a parent IFNG polypeptide position; The position introduced here consists of surface exposed amino acid residues which do not comprise an attachment group;
And the resulting modified polypeptide consists of conjugating with a non-polypeptide moiety having amino acid residues removed or introduced with an attachment.
[31" claim-type="Currently amended] 31. The method of claim 30, wherein the non-polypeptide moiety is selected from polymers, sugar moieties, lipophilic groups, organic derived materials.
[32" claim-type="Currently amended] 26. A method of preparing a conjugate according to any one of claims 1 to 25, wherein the polypeptide portion of the conjugate consists of reacting with the molecule to be conjugated under conditions where conjugation can occur and recovering the conjugate formed. Way.
[33" claim-type="Currently amended] A pharmaceutical composition comprising the conjugate according to any one of claims 1 to 25 and a pharmaceutically acceptable diluent, carrier or adjuvant.
[34" claim-type="Currently amended] A pharmaceutical composition for the treatment of diseases, in particular for treating interstitial lung diseases, more specifically idiopathic pulmonary fibrosis, comprising a conjugate according to any one of claims 1 to 25 and a pharmaceutically acceptable diluent, carrier or adjuvant. Pharmaceutical composition, characterized in that configured.
[35" claim-type="Currently amended] The conjugate according to any one of claims 1 to 25 or the pharmaceutical composition according to claim 34, characterized in that the treatment of diseases, in particular interstitial lung disease, more specifically idiopathic pulmonary fibrosis.

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引用文献:

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公开号 | 申请日 | 公开日 | 申请人 | 专利标题

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法律状态:
1999-11-12|Priority to DKPA199901631

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1999-11-12|Priority to DKPA199901631

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1999-11-18|Priority to US16629399P

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1999-11-18|Priority to US60/166,293

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2000-03-17|Priority to DKPA200000447

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2000-03-17|Priority to DKPA200000447

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2000-11-13|Application filed by 맥시겐 홀딩스 리미티드

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2000-11-13|Priority to PCT/DK2000/000631

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2002-08-13|Publication of KR20020065517A

优先权:

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申请号 | 申请日 | 专利标题

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DKPA199901631|1999-11-12|

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DKPA199901631|1999-11-12|

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US16629399P| true| 1999-11-18|1999-11-18|

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US60/166,293|1999-11-18|

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DKPA200000447|2000-03-17|

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DKPA200000447|2000-03-17|

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PCT/DK2000/000631|WO2001036001A2|1999-11-12|2000-11-13|Interferon gamma conjugates|